RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TRIM64A6NGJ6 449 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 TRIM64BA6NI03 449 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 BBIP1A8MTZ0 92 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 M0R082 166 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 IFNA14P01570 189 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CRYAAP02489 173 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 GRPRP30550 384 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 ARFIP2P53365 341 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CDH12P55289 794 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CLDN17P56750 224 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 TNK1Q13470 666 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 VEZF1Q14119 521 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 RAB35Q15286 201 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 DUSP7Q16829 419 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 TBRG1Q3YBR2 411 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 GLIPR1L2Q4G1C9 344 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 C9orf135Q5VTT2 229 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 DNM1P46Q6ZS02 220 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CCDC80Q76M96 950 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 PXKQ7Z7A4 578 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 RETREG3Q86VR2 466 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 UEVLDQ8IX04 471 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CIARTQ8N365 385 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 PCYOX1LQ8NBM8 494 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 OR8J3Q8NGG0 315 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 MCHR1Q99705 422 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 ARHGDIGQ99819 225 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 SMR3AQ99954 134 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 KCNS3Q9BQ31 491 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 KATNB1Q9BVA0 655 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 SLC19A3Q9BZV2 496 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 POLR2J2Q9GZM3 115 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 POLR2J3Q9H1A7 115 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 MRPL39Q9NYK5 338 aaKnown RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 KLHL14Q9P2G3 628 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 B3GAT1Q9P2W7 334 aa12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CRNNQ9UBG3 495 aaPredicted RBP12.71□□□□□ -0.37
NIF3L1-205ENST00000409588 CADP27708 2225 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 IGKV1D-42A0A075B6H8 117 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 A0A1W2PR80 420 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 MS4A18H0YCH9 400 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 H7C417 338 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 SLC22A2O15244 555 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 CHP2O43745 196 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 SASH3O75995 380 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 NQO1P15559 274 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 CDH2P19022 906 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 AQP1P29972 269 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 PCGF2P35227 344 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 CDKN1AP38936 164 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 ROR2Q01974 943 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 PMS2P3Q13401 168 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 VMACQ2NL98 169 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 TRMT5Q32P41 509 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 MS4A18Q3C1V0 323 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 MMEL1Q495T6 779 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 NANOGP8Q6NSW7 305 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 ERICH5Q6P6B1 374 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 KDM8Q8N371 416 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 OR4F15Q8NGB8 312 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 OR10A6Q8NH74 314 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 RNF217Q8TC41 542 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 THOC1Q96FV9 657 aaKnown RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 ECSITQ9BQ95 431 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 RHNO1Q9BSD3 238 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 C1QTNF6Q9BXI9 259 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 TMEM120AQ9BXJ8 343 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 PCDHAC1Q9H158 963 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 DENND2DQ9H6A0 471 aaPredicted RBP12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 B3GAT2Q9NPZ5 323 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 GID8Q9NWU2 228 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 AP3M1Q9Y2T2 418 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 ATP23Q9Y6H3 246 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
NIF3L1-205ENST00000409588 ZNF726A6NNF4 738 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 TPST2O60704 377 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 ENTPD5O75356 428 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 UPK3AO75631 287 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 IGHV4-39P01824 125 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 BGLAPP02818 100 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 CBR1P16152 277 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 ARR3P36575 388 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 MTPNP58546 118 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 PPP2R2BQ00005 443 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 PUDPQ08623 228 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 HIKESHIQ53FT3 197 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 C11orf71Q6IPW1 123 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 TTC33Q6PID6 262 aaPredicted RBP12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 COMTD1Q86VU5 262 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 SMYD1Q8NB12 490 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 LRRC58Q96CX6 371 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 GPR35Q9HC97 309 aa12.69□□□□□ -0.38
NIF3L1-205ENST00000409588 BAG5Q9UL15 447 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms