RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RNPS1Q15287 305 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 RFX4Q33E94 735 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 ACSF3Q4G176 576 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 NSUN5P2Q63ZY6 315 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 P4HA3Q7Z4N8 544 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 LSRQ86X29 649 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 PARP8Q8N3A8 854 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 CLDN22Q8N7P3 220 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 OR51A7Q8NH64 312 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 FANK1Q8TC84 345 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 MAGEE2Q8TD90 523 aaPredicted RBP14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 TRIB1Q96RU8 372 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 GPA33Q99795 319 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 SMURF2Q9HAU4 748 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 CLCF1Q9UBD9 225 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 SIGLEC7Q9Y286 467 aa14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 UTP20O75691 2785 aaKnown RBP14.74□□□□□ -0.05
TSPAN4-208ENST00000409531 TRAV27A0A087WT01 109 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 A0A1W2PNV4 684 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 CD8B2A6NJW9 211 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 SOCS2O14508 198 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 CYTIPO60759 359 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 PTP4A3O75365 173 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 NDUFB2O95178 105 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 AHCYP23526 432 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 UQCRC1P31930 480 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 RAD23AP54725 363 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 IL1RL1Q01638 556 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 RPL18Q07020 188 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 LRRC36Q1X8D7 754 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 C1orf185Q5T7R7 199 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 LPCAT4Q643R3 524 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 ABLIM2Q6H8Q1 611 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 SMARCD3Q6STE5 483 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 KLHL17Q6TDP4 642 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 ZNF620Q6ZNG0 422 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 NCCRP1Q6ZVX7 275 aaPredicted RBP14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 MCEMP1Q8IX19 187 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 OR52L1Q8NGH7 329 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 FNDC9Q8TBE3 224 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 RNF128Q8TEB7 428 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 WNT2BQ93097 391 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 OXGR1Q96P68 337 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 TNFRSF13CQ96RJ3 184 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 TM9SF2Q99805 663 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 SF3B5Q9BWJ5 86 aaKnown RBP14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 FANCFQ9NPI8 374 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 KLHL9Q9P2J3 617 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 CDH10Q9Y6N8 788 aa14.73□□□□□ -0.05
TSPAN4-208ENST00000409531 IGHV3-15A0A0B4J1V0 119 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 LOC102725191A0A1B0GVB3 256 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 RNF13O43567 381 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 OSMP13725 252 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 P2RY4P51582 365 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 ESRRGP62508 458 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 RASGEF1BQ0VAM2 473 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 PMPCAQ10713 525 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 PDK3Q15120 406 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 POU4F3Q15319 338 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 ALG10Q5BKT4 473 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 FBXW10Q5XX13 1052 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 OR2A2Q6IF42 318 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 B3GNT6Q6ZMB0 384 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 PXKQ7Z7A4 578 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 GPAT4Q86UL3 456 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 CCDC103Q8IW40 242 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 MARVELD2Q8N4S9 558 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 ANKK1Q8NFD2 765 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 TEX47Q8TBZ9 253 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 ROBO4Q8WZ75 1007 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 RND1Q92730 232 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 SLC29A1Q99808 456 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 TACO1Q9BSH4 297 aaKnown RBP14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 OR52D1Q9H346 318 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 MCCC2Q9HCC0 563 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 GP6Q9HCN6 339 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 GLRX2Q9NS18 164 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 TAS2R5Q9NYW4 299 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 IL20Q9NYY1 176 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 COQ3Q9NZJ6 369 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 UNC79Q9P2D8 2635 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 SEC14L4Q9UDX3 406 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 TMEFF2Q9UIK5 374 aaPredicted RBP14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 NOX1Q9Y5S8 564 aa14.72□□□□□ -0.05
TSPAN4-208ENST00000409531 C11orf98E9PRG8 122 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 MS4A18H0YCH9 400 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 H3BN98 237 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 GPR171O14626 319 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 ZNF43P17038 809 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 SLC6A6P31641 620 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 RPL4P36578 427 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 AQP2P41181 271 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 PTDSS1P48651 473 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 SLC16A1P53985 500 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 FHL1Q13642 323 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 C1DQ13901 141 aaKnown RBP14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 MS4A18Q3C1V0 323 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 RTL6Q6ICC9 239 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 UEVLDQ8IX04 471 aa14.71□□□□□ -0.05
TSPAN4-208ENST00000409531 RPRMLQ8N4K4 120 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms