RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 MCCC2Q9HCC0 563 aa17.53■□□□□ 0.4
PDLIM2-207ENST00000409417 RCE1Q9Y256 329 aa17.53■□□□□ 0.4
PDLIM2-207ENST00000409417 NOX1Q9Y5S8 564 aa17.53■□□□□ 0.4
PDLIM2-207ENST00000409417 TRAF3IP2O43734 574 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 H1F0P07305 194 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 AHCYP23526 432 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 IL32P24001 234 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 TSPO2Q5TGU0 170 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 RNF113BQ8IZP6 322 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 POMGNT2Q8NAT1 580 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 ACOT11Q8WXI4 607 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 POP5Q969H6 163 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 USB1Q9BQ65 265 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 SLCO5A1Q9H2Y9 848 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 IL1RAPQ9NPH3 570 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 SLC7A10Q9NS82 523 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 TAS2R5Q9NYW4 299 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 SPG11Q96JI7 2443 aa17.52■□□□□ 0.4
PDLIM2-207ENST00000409417 OR6C65A6NJZ3 312 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 A6NNC1 897 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 CASKO14936 926 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 ATP5HO75947 161 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 OR7A10O76100 309 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF432O94892 652 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 OR6A2O95222 327 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 ADORA3P0DMS8 318 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 UMPSP11172 480 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 HLA-DOBP13765 273 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 FUT1P19526 365 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 IGHV1-2P23083 117 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 SELENOPP49908 381 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 CLDN17P56750 224 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 FAPQ12884 760 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 NHLRC1Q6VVB1 395 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF730Q6ZMV8 503 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 C22orf34Q6ZV56 151 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 SLC7A13Q8TCU3 470 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 S100PBPQ96BU1 408 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 BPIFA2Q96DR5 249 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF226Q9NYT6 803 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 UPB1Q9UBR1 384 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 POLQO75417 2590 aa17.51■□□□□ 0.39
PDLIM2-207ENST00000409417 A0A087WUU8 490 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 TCRBV5S2A0A599 114 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 FAM221AA4D161 298 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 CYSRT1A8MQ03 144 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 PDLIM1O00151 329 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 PIP5K1CO60331 668 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 CTAG2O75638 210 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 DNAJC8O75937 253 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 LYZL6O75951 148 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 FABP3P05413 133 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 RASSF2P50749 326 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 LSM11P83369 360 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 POU3F1Q03052 451 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 ZP4Q12836 540 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 TRAP1Q12931 704 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 TSC22D1Q15714 1073 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 NIPAL3Q6P499 406 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 PGM2L1Q6PCE3 622 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 MBOAT2Q6ZWT7 520 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 BHLHA15Q7RTS1 189 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 NANOGNBQ7Z5D8 188 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 NRMQ8IXM6 262 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF433Q8N7K0 673 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 ANKK1Q8NFD2 765 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 DHRS1Q96LJ7 313 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 TAS2R16Q9NYV7 291 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 ACOT8O14734 319 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 AKAP8O43823 692 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 DIRAS1O95057 198 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 GOSR1O95249 250 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 STAMBPO95630 424 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 IFI30P13284 250 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 DNAJA1P31689 397 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 SMIM11AP58511 58 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 PRKCDQ05655 676 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 TBPL2Q6SJ96 375 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 PIWIL3Q7Z3Z3 882 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 SEPHS2Q99611 448 aa17.5■□□□□ 0.39
PDLIM2-207ENST00000409417 LRBAP50851 2863 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 C11orf98E9PRG8 122 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 BLOC1S5-TXNDC5H3BN57 136 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 RNF13O43567 381 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 KRT33AO76009 404 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 THBDP07204 575 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 PODNL1Q6PEZ8 512 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 RRM2BQ7LG56 351 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 ABHD12BQ7Z5M8 362 aaPredicted RBP17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 HSD17B8Q92506 261 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 ZC3HAV1LQ96H79 300 aaKnown RBP17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 TXNDC15Q96J42 360 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 LRGUKQ96M69 825 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 OR2M2Q96R28 347 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF347Q96SE7 839 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 LINC00470Q9BZP3 86 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 RASSF1Q9NS23 344 aa17.49■□□□□ 0.39
PDLIM2-207ENST00000409417 PRR14LQ5THK1 2151 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TEX15Q9BXT5 2789 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 GSC2O15499 205 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms