RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 EPHA2P29317 976 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 UQCRC1P31930 480 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 NTF4P34130 210 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CA7P43166 264 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 CASP6P55212 293 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PER3P56645 1201 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 RPS4XP62701 263 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ERVK-25P63136 954 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PPP2R2BQ00005 443 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 MFSD13AQ14CX5 517 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ALG10Q5BKT4 473 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF620Q6ZNG0 422 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 MCEMP1Q8IX19 187 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 LINC00471Q8N535 108 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 SCAIQ8N9R8 606 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 LIPHQ8WWY8 451 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF184Q99676 751 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PSD2Q9BQI7 771 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 OSBPL10Q9BXB5 764 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 GABARAPL1Q9H0R8 117 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 C8orf4Q9NR00 106 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 KRT84Q9NSB2 600 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 PAQR5Q9NXK6 330 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 REV1Q9UBZ9 1251 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 B3GALT5Q9Y2C3 310 aa12.56□□□□□ -0.4
CHRNA1-204ENST00000409323 FREM1Q5H8C1 2179 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 ARRDC5A6NEK1 342 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF716A6NP11 495 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 PPP1R3DO95685 299 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 IGF2P01344 180 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 IFNGR1P15260 489 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 CLDN17P56750 224 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 CTXN1P60606 82 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 C1DQ13901 141 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 DAG1Q14118 895 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 GK3PQ14409 553 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 SLC17A1Q14916 467 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 CARD17Q5XLA6 110 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 KDM4DQ6B0I6 523 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 GALNT11Q8NCW6 608 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 DNAJC9Q8WXX5 260 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 WNT2BQ93097 391 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 C9orf16Q9BUW7 83 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 KATNB1Q9BVA0 655 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 RIBC2Q9H4K1 309 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 RNF122Q9H9V4 155 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 TBC1D23Q9NUY8 699 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 HIF3AQ9Y2N7 669 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF175Q9Y473 711 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF462Q96JM2 2506 aa12.55□□□□□ -0.4
CHRNA1-204ENST00000409323 CD8B2A6NJW9 211 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 LRRTM2O43300 516 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 FZD7O75084 574 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 IGHV3-9P01782 118 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 ALPLP05186 524 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 ACADSP16219 412 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF43P17038 809 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 LGALS3BPQ08380 585 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 SLC35F1Q5T1Q4 408 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 VWA1Q6PCB0 445 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 RASSF6Q6ZTQ3 369 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 NUFIP2Q7Z417 695 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 CCDC71Q8IV32 467 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 UEVLDQ8IX04 471 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 LRRC75AQ8NAA5 344 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 RASD2Q96D21 266 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 OXGR1Q96P68 337 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 RBM4BQ9BQ04 359 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 IFT27Q9BW83 186 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 RBM4Q9BWF3 364 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 TSSK6Q9BXA6 273 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 INIPQ9NRY2 104 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 MEMO1Q9Y316 297 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 FLVCR1Q9Y5Y0 555 aa12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 DIDO1Q9BTC0 2240 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-204ENST00000409323 A0A0G2JNJ9 132 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 A0A1W2PNV4 684 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 MBD3L4A6NDZ8 208 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 MBD3L3A6NE82 208 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 MBD3L5A6NJ08 208 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 M0R129 80 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 IMPA2O14732 288 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 DNPH1O43598 174 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 TRAF3IP2O43734 574 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 NDUFB2O95178 105 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 SNAP29O95721 258 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 STSP08842 583 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 GSTM3P21266 225 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 ALDH3A2P51648 485 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 RUNX1T1Q06455 604 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 CREB3L2Q70SY1 520 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms