RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 TEX12Q9BXU0 123 aa18.31■□□□□ 0.52
CHKB-201ENST00000406938 PRRG3Q9BZD7 231 aa18.31■□□□□ 0.52
CHKB-201ENST00000406938 PRDM14Q9GZV8 571 aa18.31■□□□□ 0.52
CHKB-201ENST00000406938 FANCFQ9NPI8 374 aa18.31■□□□□ 0.52
CHKB-201ENST00000406938 CAMK2AQ9UQM7 478 aa18.31■□□□□ 0.52
CHKB-201ENST00000406938 ZNHIT1O43257 154 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 NOS3P29474 1203 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 ISL1P61371 349 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 POU3F1Q03052 451 aaPredicted RBP18.3■□□□□ 0.52
CHKB-201ENST00000406938 TOP3AQ13472 1001 aaPredicted RBP18.3■□□□□ 0.52
CHKB-201ENST00000406938 KRT80Q6KB66 452 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 PCSK4Q6UW60 755 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 FAM122BQ7Z309 247 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 GPAT4Q86UL3 456 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 DEPDC4Q8N2C3 294 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 MARVELD2Q8N4S9 558 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 ANKK1Q8NFD2 765 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 SARAFQ96BY9 339 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 SLC38A2Q96QD8 506 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 TSPAN32Q96QS1 320 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 RASSF1Q9NS23 344 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 KLHL13Q9P2N7 655 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 RNF6Q9Y252 685 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 PCDHGB5Q9Y5G0 923 aa18.3■□□□□ 0.52
CHKB-201ENST00000406938 TLN1Q9Y490 2541 aaKnown RBP18.3■□□□□ 0.52
CHKB-201ENST00000406938 NPIPA2E9PIF3 369 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 NPIPA3F8WFD2 350 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 ARPC3O15145 178 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 SURF4O15260 269 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 PRKYO43930 277 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 PCYT1AP49585 367 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 SNAPC1Q16533 368 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 PRR30Q53SZ7 412 aaPredicted RBP18.29■□□□□ 0.52
CHKB-201ENST00000406938 TMEM225Q6GV28 225 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 THAP5Q7Z6K1 395 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 PXKQ7Z7A4 578 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 GHDCQ8N2G8 530 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 LSM14AQ8ND56 463 aaKnown RBP18.29■□□□□ 0.52
CHKB-201ENST00000406938 FAR1Q8WVX9 515 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 ROBO4Q8WZ75 1007 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 SNRNP40Q96DI7 357 aaKnown RBP18.29■□□□□ 0.52
CHKB-201ENST00000406938 PAQR5Q9NXK6 330 aaPredicted RBP18.29■□□□□ 0.52
CHKB-201ENST00000406938 ZNF226Q9NYT6 803 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 UBAP1Q9NZ09 502 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 RASD1Q9Y272 281 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 HSPE1-MOB4S4R3N1 261 aa18.29■□□□□ 0.52
CHKB-201ENST00000406938 TEX13CA0A0J9YWL9 993 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 SLC2A10O95528 541 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 HMGN1P05114 100 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 APEHP13798 732 aaKnown RBP18.28■□□□□ 0.52
CHKB-201ENST00000406938 SDHAP31040 664 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 CD47Q08722 323 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 MAD2L1BPQ15013 274 aaPredicted RBP18.28■□□□□ 0.52
CHKB-201ENST00000406938 PDK3Q15120 406 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 ACKR1Q16570 336 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 TCEANCQ8N8B7 351 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 RASD2Q96D21 266 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 PLEKHA8Q96JA3 519 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 Q96M85 177 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 IL4I1Q96RQ9 567 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 CMC2Q9NRP2 79 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 GRHPRQ9UBQ7 328 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 AASSQ9UDR5 926 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 GPR52Q9Y2T5 361 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 DNAJC13O75165 2243 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 USP24Q9UPU5 2620 aa18.28■□□□□ 0.52
CHKB-201ENST00000406938 A0A1W2PRG6 482 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 OR14I1A6ND48 311 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 IGHMP01871 453 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 HIST1H1CP16403 213 aaKnown RBP18.27■□□□□ 0.52
CHKB-201ENST00000406938 TDGF1P3P51864 188 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 PON3Q15166 354 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 KRTCAP3Q53RY4 240 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 ABLIM2Q6H8Q1 611 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 PLXDC2Q6UX71 529 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 PTCHD4Q6ZW05 846 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 CHMP1BQ7LBR1 199 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 FGD2Q7Z6J4 655 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 UEVLDQ8IX04 471 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 OR8J1Q8NGP2 316 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 CNIH3Q8TBE1 160 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 OXGR1Q96P68 337 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 TUBA1CQ9BQE3 449 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 TXNIPQ9H3M7 391 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 ZNF346Q9UL40 294 aaKnown RBP18.27■□□□□ 0.52
CHKB-201ENST00000406938 MCTS1Q9ULC4 181 aaKnown RBP18.27■□□□□ 0.52
CHKB-201ENST00000406938 NOX1Q9Y5S8 564 aa18.27■□□□□ 0.52
CHKB-201ENST00000406938 RIIAD1A6NNX1 92 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 TRAF3IP2O43734 574 aaPredicted RBP18.27■□□□□ 0.51
CHKB-201ENST00000406938 IDH3BO43837 385 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 VAMP5O95183 116 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 SYNGR4O95473 234 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 TXNDC12O95881 172 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 IFNGR1P15260 489 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 GABRB1P18505 474 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 RPL27P61353 136 aaKnown RBP18.27■□□□□ 0.51
CHKB-201ENST00000406938 EFNB1P98172 346 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 MELKQ14680 651 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 FCRLAQ7L513 359 aa18.27■□□□□ 0.51
CHKB-201ENST00000406938 PM20D2Q8IYS1 436 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms