RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 KIR3DP1A8MWS1 328 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 FZD7O75084 574 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 SNX4O95219 450 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 PLGP00747 810 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-205ENST00000401607 AHCYP23526 432 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 DIO1P49895 249 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 LGALS3BPQ08380 585 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 POU4F2Q12837 409 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 MFSD13AQ14CX5 517 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 SLC35D3Q5M8T2 416 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 LCN1P1Q5VSP4 162 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 ASCL5Q7RTU5 278 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 GPALPP1Q8IXQ4 340 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 OR10H4Q8NGA5 316 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 ADAMTS14Q8WXS8 1223 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 SMPDL3BQ92485 455 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 UBL7Q96S82 380 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-205ENST00000401607 TBX5Q99593 518 aa23.08■■□□□ 1.29
CPNE1-205ENST00000401607 RPRD1BQ9NQG5 326 aaKnown RBP23.08■■□□□ 1.29
CPNE1-205ENST00000401607 PROB1E7EW31 1015 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 TRIM3O75382 744 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 LALBAP00709 142 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 DPP4P27487 766 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 DNASE1L1P49184 302 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 NOVA1P51513 510 aaKnown RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 C19orf57Q0VDD7 668 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 PON3Q15166 354 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SOWAHCQ53LP3 525 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 PHC2Q8IXK0 858 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SCAIQ8N9R8 606 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SMAP2Q8WU79 429 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SPRYD4Q8WW59 207 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 JSRP1Q96MG2 331 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 TMEM185BQ9H7F4 350 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 INPP5EQ9NRR6 644 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SACM1LQ9NTJ5 587 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 NDUFB11Q9NX14 153 aa23.07■■□□□ 1.28
CPNE1-205ENST00000401607 SPIN1Q9Y657 262 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-205ENST00000401607 H7C1C5 153 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 OR6A2O95222 327 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 IGHMP01871 453 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 TFP02787 698 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 P04436 131 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CPEP16870 476 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CYB561P49447 251 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CLK1P49759 484 aaKnown RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 DSCR4P56555 118 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 LCN6P62502 163 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ZP4Q12836 540 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 MYBPHQ13203 477 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 SELENBP1Q13228 472 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ACKR1Q16570 336 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 GLYR1Q49A26 553 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 LINC01590Q5TEZ4 76 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 LIPKQ5VXJ0 399 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ZNF322Q6U7Q0 402 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 GTPBP8Q8N3Z3 284 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ARIH2OSQ8N7S6 290 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ZNF519Q8TB69 540 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 TSSK2Q96PF2 358 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CHCHD6Q9BRQ6 235 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ALG8Q9BVK2 526 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 STMN3Q9NZ72 180 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CAB39Q9Y376 341 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 DOCK10Q96BY6 2186 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 DAPL1A0PJW8 107 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 MS4A18H0YCH9 400 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 SHC1P29353 583 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 MS4A18Q3C1V0 323 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 IGF2-ASQ6U949 168 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 CENPOQ9BU64 300 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 TXNIPQ9H3M7 391 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 ALKBH4Q9NXW9 302 aa23.06■■□□□ 1.28
CPNE1-205ENST00000401607 RPH3AQ9Y2J0 694 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-205ENST00000401607 LOC100506127A0A0U1RQW1 187 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 GPX5O75715 221 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 GLCEO94923 617 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 OPN1LWP04000 364 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 GTF2E2P29084 291 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 PYCR1P32322 319 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 RPS3AP61247 264 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 RPL27P61353 136 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 ZNF85Q03923 595 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 AIMP2Q13155 320 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 TPBGQ13641 420 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 GALEQ14376 348 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 H1FNTQ75WM6 255 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 TMPRSS7Q7RTY8 843 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 POMGNT2Q8NAT1 580 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 KIAA1143Q96AT1 154 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 CNN2Q99439 309 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 RNF167Q9H6Y7 350 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 ISG20L2Q9H9L3 353 aaKnown RBP23.05■■□□□ 1.28
CPNE1-205ENST00000401607 CHST11Q9NPF2 352 aa23.05■■□□□ 1.28
CPNE1-205ENST00000401607 DCTN6O00399 190 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ZIC3O60481 467 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 HLA-DOBP13765 273 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 ITGA3P26006 1051 aa23.04■■□□□ 1.28
CPNE1-205ENST00000401607 PUDPQ08623 228 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms