RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 HIST1H3AP68431 136 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM183BQ1AE95 376 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 COMMD6Q7Z4G1 85 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 OR4C5Q8NGB2 326 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 IKZF5Q9H5V7 419 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 PDE7BQ9NP56 450 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 LSM5Q9Y4Y9 91 aaKnown RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 IGKV6-21A0A0C4DH24 114 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SERTM1A2A2V5 107 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 ARL5CA6NH57 179 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 GPR89AB7ZAQ6 455 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SLC35G4P0C7Q5 338 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 GPR89BP0CG08 455 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TAS2R38P59533 333 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 HERV-K104P61576 105 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 HBA1P69905 142 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SMAD3P84022 425 aaKnown RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 CBFBQ13951 182 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 RPS26P11Q5JNZ5 115 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM244Q5VVB8 128 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TPRG1Q6ZUI0 275 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TTLL10Q6ZVT0 673 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 ZDHHC22Q8N966 263 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 THEM6Q8WUY1 208 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NEURL3Q96EH8 262 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 KLHL15Q96M94 604 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 PACRGQ96M98 296 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SLC25A18Q9H1K4 315 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM231Q9H6L2 316 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 MRPL17Q9NRX2 175 aaKnown RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 GRHPRQ9UBQ7 328 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 OR10H2O60403 315 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 FBXO24O75426 580 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NAA10P41227 235 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 PRPS1P60891 318 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 HFEQ30201 348 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 FAHD2BQ6P2I3 314 aaPredicted RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 UBE3DQ7Z6J8 389 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 M1APQ8TC57 530 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 FAHD2AQ96GK7 314 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 ZNF558Q96NG5 402 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 GGACTQ9BVM4 153 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 MRPS18AQ9NVS2 196 aaKnown RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 SIRT5Q9NXA8 310 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 CNIH4Q9P003 139 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 PITPNC1Q9UKF7 332 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 LSM2Q9Y333 95 aaKnown RBP9.25□□□□□ -0.93
PTPRM-203ENST00000400060 NPTNQ9Y639 398 aa9.25□□□□□ -0.93
PTPRM-203ENST00000400060 DOT1LQ8TEK3 1739 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR5H15A6NDH6 313 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR5H1A6NKK0 313 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 M0R3H8 397 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR1F1O43749 312 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ABLIM3O94929 683 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 POP4O95707 220 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 CST4P01036 141 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 HBQ1P09105 142 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 AKT2P31751 481 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 KCNAB1Q14722 419 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 NKPD1Q17RQ9 610 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 TMEM35AQ53FP2 167 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 PAQR6Q6TCH4 344 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 GABRG1Q8N1C3 465 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 NAXEQ8NCW5 288 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR9A1PQ8NGU1 263 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 SLC35B3Q9H1N7 401 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 PRO1933Q9H354 126 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 EGLN3Q9H6Z9 239 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 MRPS33Q9Y291 106 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 MAN2B1O00754 1011 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 NDUFS4O43181 175 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 HTRA3P83110 453 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ALKBH1Q13686 389 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 SLC17A1Q14916 467 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 RPUSD3Q6P087 351 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 C19orf48Q6RUI8 117 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 PRSS45Q7RTY3 260 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 SERINC5Q86VE9 423 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR51L1Q8NGJ5 315 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 OR5M1Q8NGP8 315 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 SEC22AQ96IW7 307 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 TXN2Q99757 166 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 PELI2Q9HAT8 420 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ZNF107Q9UII5 783 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 C1orf226A1L170 272 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 SAP18O00422 153 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 GPR32O75388 356 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 TBXA2RP21731 343 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 GPR1P46091 355 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 RIDAP52758 137 aaKnown RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 PITX1P78337 314 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ADGRF1Q5T601 910 aa9.24□□□□□ -0.93
PTPRM-203ENST00000400060 ZNF551Q7Z340 670 aaPredicted RBP9.24□□□□□ -0.93
PTPRM-203ENST00000400060 CAMKMTQ7Z624 323 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms