RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 J3QRE1 110 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 LCMT2O60294 686 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 PRNPP04156 253 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ZNF3P17036 446 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 MPGP29372 298 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 FAUP35544 74 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 PTGFRP43088 359 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 S100A12P80511 92 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 SRSF3P84103 164 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 GXYLT1Q4G148 440 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ETFBKMTQ8IXQ9 262 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 SLC16A11Q8NCK7 471 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 OR6K3Q8NGY3 331 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TCEAL3Q969E4 200 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TIFAQ96CG3 184 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ASB16Q96NS5 453 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 XKR8Q9H6D3 395 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ACSS1Q9NUB1 689 aaPredicted RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 RASL12Q9NYN1 266 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 DHCR7Q9UBM7 475 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 FARSAQ9Y285 508 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 NOP16Q9Y3C1 178 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 V9GY05 133 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TMEM272A0A1B0GTI8 110 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TMEM218A2RU14 115 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 MAN2B1O00754 1011 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 UBBP0CG47 229 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 UBCP0CG48 685 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 RFC3P40938 356 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 RPS27AP62979 156 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 UBA52P62987 128 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 LURAP1LQ8IV03 231 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 PRMT8Q9NR22 394 aaPredicted RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 MYEF2Q9P2K5 600 aaKnown RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 OR5V1Q9UGF6 321 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 OR6C76A6NM76 312 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 AGPAT2O15120 278 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 LINC01565O15544 149 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 CDK5R1Q15078 307 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ELFN2Q5R3F8 820 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 PSRC1Q6PGN9 363 aaPredicted RBP15.66■□□□□ 0.1
PTPRA-205ENST00000399903 OR4N5Q8IXE1 308 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 CDS1Q92903 461 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 ZNF285Q96NJ3 590 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TLNRD1Q9H1K6 362 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 GSN-AS1Q9NRJ2 163 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 WDR45Q9Y484 360 aa15.66■□□□□ 0.1
PTPRA-205ENST00000399903 TRAV18A0A075B6X5 111 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 GP1BAP07359 652 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 HNRNPA1P09651 372 aaKnown RBP eCLIP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 DLSTP36957 453 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 P2RY2P41231 377 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 FXYD6P3P58550 94 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 KRT77Q7Z794 578 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 GJD3Q8N144 294 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 STEAP2Q8NFT2 490 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 SMIM19Q96E16 107 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 CNRIP1Q96F85 164 aaPredicted RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 LHX9Q9NQ69 397 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 MBD2Q9UBB5 411 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 ST6GALNAC2Q9UJ37 374 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 FAM96BQ9Y3D0 163 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 ATG4BQ9Y4P1 393 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 IMPA2O14732 288 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 AQP8O94778 261 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 APEHP13798 732 aaKnown RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 ZNF528Q3MIS6 628 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 WDR88Q6ZMY6 472 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 SMARCD2Q92925 531 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 SLITRK2Q9H156 845 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 MEPEQ9NQ76 525 aaPredicted RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 TRAV1-2A0A0B4J238 106 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 FGF19O95750 216 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 LAMP2P13473 410 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 F3P13726 295 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 AQP2P41181 271 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 SNTB1Q13884 538 aaKnown RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 OR4C11Q6IEV9 310 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 EIF4E3Q8N5X7 224 aaKnown RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 TMEM239Q8WW34 195 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 TNFRSF13CQ96RJ3 184 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 POFUT1Q9H488 388 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 ZMAT3Q9HA38 289 aaKnown RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 GTF2A1LQ9UNN4 478 aa15.65■□□□□ 0.1
PTPRA-205ENST00000399903 YBX2Q9Y2T7 364 aaKnown RBP15.65■□□□□ 0.1
PTPRA-205ENST00000399903 M0QYG6 137 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 PIN1P1O15428 100 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 RAD1O60671 282 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 ITGA10O75578 1167 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 CD3DP04234 171 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 MGMTP16455 207 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 ID2Q02363 134 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 ELAVL3Q14576 367 aaKnown RBP15.64■□□□□ 0.09
PTPRA-205ENST00000399903 C2orf27AQ580R0 203 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 GLB1L2Q8IW92 636 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 OR10R2Q8NGX6 335 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 CXorf40AQ8TE69 158 aa15.64■□□□□ 0.09
PTPRA-205ENST00000399903 GLYATL2Q8WU03 294 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms