RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 ARFGAP1Q8N6T3 406 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 OR5D13Q8NGL4 314 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 OSMRQ99650 979 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 NECAP2Q9NVZ3 263 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF320A2RRD8 509 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 CNMDO75829 334 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 MMP11P24347 488 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 ABCD3P28288 659 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 APOFQ13790 326 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 TBC1D10CQ8IV04 446 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 SLC35C1Q96A29 364 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 KIAA1191Q96A73 305 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 PINX1Q96BK5 328 aaKnown RBP8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF845Q96IR2 970 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 CDC42BPAQ5VT25 1732 aa8.04□□□□□ -1.12
CACNA1C-220ENST00000399655 HMGXB3Q12766 1538 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 GRXCR1A8MXD5 290 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CD200P41217 278 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FXNQ16595 210 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 C15orf52Q6ZUT6 534 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CTSFQ9UBX1 484 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 HHLA2Q9UM44 414 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 RPL30P62888 115 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 SFXN4Q6P4A7 337 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LRP11Q86VZ4 500 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 NKAIN3Q8N8D7 197 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR8G5Q8NG78 346 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 TCFL5Q9UL49 500 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CKMT1AP12532 417 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MYADMQ96S97 322 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 A0A0U1RQJ8 604 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MS4A18H0YCH9 400 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PIRO00625 290 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR13C7P0DN81 318 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CKMT2P17540 419 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CLCN3P51790 818 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 GALNT2Q10471 571 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MS4A18Q3C1V0 323 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 RBPMS2Q6ZRY4 209 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PHF13Q86YI8 300 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR10AG1Q8NH19 301 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 C1GALT1Q9NS00 363 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 NLRP1Q9C000 1473 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 hCG_1818297A0A087WSY0 165 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LNP1A1A4G5 178 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FAM227AF5H4B4 570 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 RNASE1P07998 156 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 NME1P15531 152 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 NMUP48645 174 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 YBX1P67809 324 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM236Q5W0B7 351 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR10J5Q8NHC4 309 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CYP2W1Q8TAV3 490 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 ADTRPQ96IZ2 230 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MAF1Q9H063 256 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR5B21A6NL26 309 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 GIPP09681 153 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PODNL1Q6PEZ8 512 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 WDR88Q6ZMY6 472 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 BRI3BPQ8WY22 251 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PIMREGQ9BSJ6 248 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 IQCF5A8MTL0 148 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 TEAD2Q15562 447 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CTU2Q2VPK5 515 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LAIR1Q6GTX8 287 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FAM71E1Q6IPT2 247 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 APOOLQ6UXV4 268 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 REM2Q8IYK8 340 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 SFXN2Q96NB2 322 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF518AQ6AHZ1 1483 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 HTR1DP28221 377 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FBXO22Q8NEZ5 403 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LKAAEAR1Q8TD35 194 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 IRGQQ8WZA9 623 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PACRGQ96M98 296 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 AGO4Q9HCK5 861 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 MRPL15Q9P015 296 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 FAM237AA0A1B0GTK4 181 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 EPHA2P29317 976 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR2B8PP59922 312 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LETMD1Q6P1Q0 360 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 VRK3Q8IV63 474 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 DTWD2Q8NBA8 298 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 CMBLQ96DG6 245 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 METTL9Q9H1A3 318 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 PPP1CCP36873 323 aaKnown RBP8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 OR1D4P47884 311 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LIMK1P53667 647 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF415Q09FC8 603 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 SPEM2Q0P670 501 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LRIT3Q3SXY7 679 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LINGO4Q6UY18 593 aa8.03□□□□□ -1.12
CACNA1C-220ENST00000399655 LRRC25Q8N386 305 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms