RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 SC5DO75845 299 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ZFPL1O95159 310 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 OLFM2O95897 454 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 NDUFS1P28331 727 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 WASP42768 502 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 CBX5P45973 191 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 NANOS3P60323 173 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 EXOSC7Q15024 291 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 NNATQ16517 81 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SCGB2B2Q4G0G5 96 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 DEFB134Q4QY38 66 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 FNDC3BQ53EP0 1204 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 B3GNTL1Q67FW5 361 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 C10orf53Q8N6V4 93 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ZPLD1Q8TCW7 415 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ARRDC3Q96B67 414 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 FOXN4Q96NZ1 517 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 LMF1Q96S06 567 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 CMSS1Q9BQ75 279 aaKnown RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 WDR13Q9H1Z4 485 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 CALML5Q9NZT1 146 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 FOXJ3Q9UPW0 622 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ANKRD20A5PA0PJZ0 165 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GRXCR1A8MXD5 290 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 M0QYG6 137 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 NDUFB6O95139 128 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GAAP10253 952 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PVALBP20472 110 aaPredicted RBP9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PRKAR1BP31321 381 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GPR85P60893 370 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 IKZF1Q13422 519 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 RAB33AQ14088 237 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PON3Q15166 354 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 AMZ1Q400G9 498 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 TCEAL5Q5H9L2 206 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PWWP2BQ6NUJ5 590 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC48A1Q6P1K1 146 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ABHD17CQ6PCB6 329 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ASPGQ86U10 573 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM219AQ8IW50 185 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 GLB1L2Q8IW92 636 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 BEST3Q8N1M1 668 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 OR51D1Q8NGF3 324 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 DPEP2Q9H4A9 486 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 PRDM7Q9NQW5 492 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 ANKRD10Q9NXR5 420 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SPHK1Q9NYA1 384 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC6A5Q9Y345 797 aa9.05□□□□□ -0.96
PTCHD4-202ENST00000398738 TRAV1-2A0A0B4J238 106 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 FAM221AA4D161 298 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 GSTZ1O43708 216 aaPredicted RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 KCNJ13O60928 360 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PAPLNO95428 1278 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 CD3DP04234 171 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 ANXA2P07355 339 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 KCNJ3P48549 501 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 EFNB2P52799 333 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PRDX1Q06830 199 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 MFSD12Q6NUT3 480 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 TCEAL8Q8IYN2 117 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 SPICQ8N5J4 248 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 COX18Q8N8Q8 333 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PNPLA2Q96AD5 504 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 C3orf49Q96BT1 292 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 RASD2Q96D21 266 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 MRGPRX3Q96LB0 322 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 Q96M85 177 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 CNN2Q99439 309 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 SDF2Q99470 211 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 NCDNQ9UBB6 729 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 APOBEC3BQ9UH17 382 aaKnown RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 EDARQ9UNE0 448 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 KIAA1671Q9BY89 1806 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 TVP23AA6NH52 213 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 ACOT7O00154 380 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PRKNO60260 465 aaPredicted RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PTP4A3O75365 173 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 HPP00738 406 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 IFNGP01579 166 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 RPN2P04844 631 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 DPP4P27487 766 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 CTAG1AP78358 180 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 SLC7A9P82251 487 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 CSRP2Q16527 193 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 NKPD1Q17RQ9 610 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 RAB12Q6IQ22 244 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 ZAR1Q86SH2 424 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 ZNF761Q86XN6 746 aaPredicted RBP9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 LILRB2Q8N423 598 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 OR2A1Q8NGT9 310 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 OR10AC1Q8NH08 325 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 PELI2Q9HAT8 420 aa9.04□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM272A0A1B0GTI8 110 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM72A0PK05 275 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TUBAL3A6NHL2 446 aa9.03□□□□□ -0.96
PTCHD4-202ENST00000398738 TMEM200CA6NKL6 621 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms