RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FMO6PO60774 539 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 SLC43A1O75387 559 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 UPK3AO75631 287 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF432O94892 652 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 OPN1SWP03999 348 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 C8BP07358 591 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 PTNP21246 168 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 PCGF2P35227 344 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 SH3BGRP55822 239 aaPredicted RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ROR2Q01974 943 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 CYLC2Q14093 348 aaPredicted RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 NRF1Q16656 503 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 DUSP7Q16829 419 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 TRMT5Q32P41 509 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 INTS11Q5TA45 600 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF544Q6NX49 715 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF613Q6PF04 617 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 PATL1Q86TB9 770 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 MUC15Q8N387 334 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ADPRHL1Q8NDY3 354 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 OR10A6Q8NH74 314 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 SLC26A7Q8TE54 656 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
VCX3A-202ENST00000398729 MCHR1Q99705 422 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 SH3GL1Q99961 368 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 WFDC6Q9BQY6 131 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ASPNQ9BXN1 380 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 ATP23Q9Y6H3 246 aa11.72□□□□□ -0.53
VCX3A-202ENST00000398729 RPL36A-HNRNPH2H7BZ11 118 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 FBP2O00757 339 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 ACVR1BP36896 505 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 CDH12P55289 794 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 MMEL1Q495T6 779 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 ANKRD16Q6P6B7 361 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 LINGO2Q7L985 606 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 UEVLDQ8IX04 471 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 GPR137CQ8N3F9 429 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 C10orf53Q8N6V4 93 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 SCAIQ8N9R8 606 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 PIK3C3Q8NEB9 887 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 GPR32P1Q8NGA4 272 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 MAGEE2Q8TD90 523 aaPredicted RBP11.71□□□□□ -0.53
VCX3A-202ENST00000398729 BCL2L2Q92843 193 aaPredicted RBP11.71□□□□□ -0.53
VCX3A-202ENST00000398729 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 KCNS3Q9BQ31 491 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 TMEM43Q9BTV4 400 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 CACNG6Q9BXT2 260 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 MOV10Q9HCE1 1003 aaKnown RBP11.71□□□□□ -0.53
VCX3A-202ENST00000398729 FGFR1OP2Q9NVK5 253 aa11.71□□□□□ -0.53
VCX3A-202ENST00000398729 GDF2Q9UK05 429 aaPredicted RBP11.71□□□□□ -0.53
VCX3A-202ENST00000398729 A0A096LPE4 126 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 ARPC4-TTLL3A0A0A6YYG9 625 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 A0A1W2PPZ6 126 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 ATP6V1G2-DDX39BF2Z307 99 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 TRAF3IP2O43734 574 aaPredicted RBP11.7□□□□□ -0.54
VCX3A-202ENST00000398729 CHP2O43745 196 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 NDUFS7O75251 213 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 MT-ATP6P00846 226 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 BGLAPP02818 100 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 BMP4P12644 408 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
VCX3A-202ENST00000398729 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
VCX3A-202ENST00000398729 ARFIP2P53365 341 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 PMS2P3Q13401 168 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 MAPRE2Q15555 327 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 VMACQ2NL98 169 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 C11orf71Q6IPW1 123 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 NANOGP8Q6NSW7 305 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 PHC2Q8IXK0 858 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 OR6T1Q8NGN1 323 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 VANGL1Q8TAA9 524 aaPredicted RBP11.7□□□□□ -0.54
VCX3A-202ENST00000398729 RASSF5Q8WWW0 418 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 SLC38A2Q96QD8 506 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 REG4Q9BYZ8 158 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 NANOGQ9H9S0 305 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 MRPL39Q9NYK5 338 aaKnown RBP11.7□□□□□ -0.54
VCX3A-202ENST00000398729 MOKQ9UQ07 419 aa11.7□□□□□ -0.54
VCX3A-202ENST00000398729 IGHV1-18A0A0C4DH31 117 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 CPSF4LA6NMK7 179 aaKnown RBP11.69□□□□□ -0.54
VCX3A-202ENST00000398729 BBIP1A8MTZ0 92 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 MS4A18H0YCH9 400 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 SSX4O60224 188 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 NPPAP01160 153 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 CRYAAP02489 173 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
VCX3A-202ENST00000398729 GZMMP51124 257 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 NUDT6P53370 316 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 ARF1P84077 181 aaKnown RBP11.69□□□□□ -0.54
VCX3A-202ENST00000398729 POU3F1Q03052 451 aaPredicted RBP11.69□□□□□ -0.54
VCX3A-202ENST00000398729 CHRNB3Q05901 458 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 PUDPQ08623 228 aa11.69□□□□□ -0.54
VCX3A-202ENST00000398729 KLF10Q13118 480 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms