RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 HIST1H1BP16401 226 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 AKR1C3P42330 323 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CYB561P49447 251 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 NOVA1P51513 510 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 DLX5P56178 289 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 RAB1AP62820 205 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SSBP2P81877 361 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TAF10Q12962 218 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 KEAP1Q14145 624 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 IHHQ14623 411 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ABRAXAS2Q15018 415 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CTF1Q16619 201 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CTU2Q2VPK5 515 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PSAPL1Q6NUJ1 521 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SSX7Q7RTT5 188 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ANKRD33Q7Z3H0 272 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MRPL52Q86TS9 123 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GLB1L2Q8IW92 636 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 AMER2Q8N7J2 671 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CLDN22Q8N7P3 220 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2M7Q8NG81 312 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SOCS4Q8WXH5 440 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 DKK4Q9UBT3 224 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SEC14L3Q9UDX4 400 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF490Q9ULM2 529 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MRPS33Q9Y291 106 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MMP24Q9Y5R2 645 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 DENND4AQ7Z401 1863 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 A0A096LPI6 279 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ANKRD66B4E2M5 251 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 BNIP3LO60238 219 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR1I1O60431 355 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CLDN11O75508 207 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2C1O95371 312 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 FADS2O95864 444 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 WNT11O96014 354 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 RPLP1P05386 114 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CELA3AP09093 270 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CD22P20273 847 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PRKACGP22612 351 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 UQCRC2P22695 453 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 LHCGRP22888 699 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SERPINA4P29622 427 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GNRHRP30968 328 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GP2P55259 537 aaKnown RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZP1P60852 638 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CCL7P80098 99 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 HIST2H2ACQ16777 129 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF181Q2M3W8 571 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 TMEM41BQ5BJD5 291 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2T5Q6IEZ7 315 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR51D1Q8NGF3 324 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR13D1Q8NGV5 346 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 OR2T29Q8NH02 315 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 CNIH3Q8TBE1 160 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ZFP90Q8TF47 636 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 FAR1Q8WVX9 515 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 LRR1Q96L50 414 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 NOL4LQ96MY1 436 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 UBL7Q96S82 380 aaPredicted RBP6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SPSB2Q99619 263 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC29A3Q9BZD2 475 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 REEP1Q9H902 201 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 HRASLSQ9HDD0 168 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 BPIFA1Q9NP55 256 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 GPR173Q9NS66 373 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 MED9Q9NWA0 146 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 PADI1Q9ULC6 663 aa6.06□□□□□ -1.44
TM9SF4-202ENST00000398022 ANKRD36A6QL64 1941 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CXorf65A6NEN9 183 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 WNT9AO14904 365 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CYB5BO43169 146 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GLUD1P00367 558 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 IFNA7P01567 189 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PVALBP20472 110 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 FPR1P21462 350 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PMELP40967 661 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 HTR5AP47898 357 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 MTNR1AP48039 350 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RAB9AP51151 201 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RPS14P62263 151 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 NAAAQ02083 359 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ELAVL2Q12926 359 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 HNRNPA0Q13151 305 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RPE65Q16518 533 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC22A6Q4U2R8 563 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 SOWAHCQ53LP3 525 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CCDC157Q569K6 752 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ARSJQ5FYB0 599 aaPredicted RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 CTSL3PQ5NE16 218 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ABHD17BQ5VST6 288 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 ERASQ7Z444 233 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 FAM220AQ7Z4H9 259 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 RBM23Q86U06 439 aaKnown RBP6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PIANPQ8IYJ0 282 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 TCTE3Q8IZS6 198 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 AQP11Q8NBQ7 271 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 PROKR2Q8NFJ6 384 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 OR52N4Q8NGI2 321 aa6.05□□□□□ -1.44
TM9SF4-202ENST00000398022 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms