RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 EIF1P41567 113 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 BCL7AQ4VC05 210 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 TRMT12Q53H54 448 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 PGAP1Q75T13 922 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 STK35Q8TDR2 534 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 GTF2H4Q92759 462 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 OR2J2O76002 312 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 HOXB5P09067 269 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 GDPD3Q7L5L3 318 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 BBS1Q8NFJ9 593 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 KCNE4Q8WWG9 221 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 EMG1Q92979 244 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 PPIL3Q9H2H8 161 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 MMACHCQ9Y4U1 282 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 HSD17B6O14756 317 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 MCCD1P59942 119 aaPredicted RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 OR2G6Q5TZ20 316 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 ABHD17CQ6PCB6 329 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 OR4A16Q8NH70 328 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 BIRC8Q96P09 236 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CRLF2Q9HC73 371 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 PLRG1O43660 514 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 IL7P13232 177 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 RPL23AP62750 156 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 FAPQ12884 760 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 ANKRD16Q6P6B7 361 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 OR7G1Q8NGA0 311 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 FRZBQ92765 325 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 PIGTQ969N2 578 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 FOXRED1Q96CU9 486 aaPredicted RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 PBDC1Q9BVG4 233 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 ARPC1BO15143 372 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 DNAJB5O75953 348 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 MBOAT2Q6ZWT7 520 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 NT5C3BQ969T7 300 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CA5AP35218 305 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CCL7P80098 99 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 SLC14A1Q13336 389 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 SPIN2AQ99865 258 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 SPIN2BQ9BPZ2 258 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 PAQR5Q9NXK6 330 aaPredicted RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 ENPP5Q9UJA9 477 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 LRIT2A6NDA9 550 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 SC5DO75845 299 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 CALCBP10092 127 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 ERP29P30040 261 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 BMP2P12643 396 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 IL10RAQ13651 578 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 BCDIN3DQ7Z5W3 292 aaKnown RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 B3GNT8Q7Z7M8 397 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 SLC16A11Q8NCK7 471 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 THAP7Q9BT49 309 aaPredicted RBP10.48□□□□□ -0.73
TTC28-201ENST00000397906 SLC22A7Q9Y694 548 aa10.48□□□□□ -0.73
TTC28-201ENST00000397906 MKRN2OSH3BPM6 223 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SELENOFO60613 162 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SLC2A1P11166 492 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 NKX2-5P52952 324 aaPredicted RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 SLC10A1Q14973 349 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SLC9A3R2Q15599 337 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 UBE2NLQ5JXB2 153 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 CBLL1Q75N03 491 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SLC35F3Q8IY50 421 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 RNF128Q8TEB7 428 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GORASP2Q9H8Y8 452 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ZNF281Q9Y2X9 895 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 PLPP1O14494 284 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 FAM157BP0CG42 384 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ACP2P11117 423 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ST6GAL1P15907 406 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 C21orf33P30042 268 aaPredicted RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 CXADRP78310 365 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 MPEG1Q2M385 716 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 TMEM45AQ9NWC5 275 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ANKRD33BA6NCL7 494 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SSTP61278 116 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 WDSUB1Q8N9V3 476 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 HYAL1Q12794 435 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 DPY19L2P1Q6NXN4 242 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 NARFLQ9H6Q4 476 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ICOSLGO75144 302 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 PIPP12273 146 aaPredicted RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 EVI2BP34910 448 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 BTG2P78543 158 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GGTA1PQ4G0N0 100 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 CCBE1Q6UXH8 406 aaPredicted RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 DCXRQ7Z4W1 244 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 FSCN3Q9NQT6 498 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 TBX21Q9UL17 535 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 MRPS28Q9Y2Q9 187 aaKnown RBP10.47□□□□□ -0.73
TTC28-201ENST00000397906 A0A1B0GWA3 101 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 KIR2DL3P43628 341 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 ZNF92Q03936 586 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 SCGB2A2Q13296 93 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 CDONQ4KMG0 1287 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 C1orf140Q5VVS0 124 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 GARNL3Q5VVW2 1013 aa10.47□□□□□ -0.73
TTC28-201ENST00000397906 RNLSQ5VYX0 342 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms