RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CPN1P15169 458 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 MAPK3P27361 379 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 NOS3P29474 1203 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PBX2P40425 430 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 RPS27AP62979 156 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 UBA52P62987 128 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 CDK5Q00535 292 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CHAF1BQ13112 559 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PDZK1IP1Q13113 114 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 DUSP5Q16690 384 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TMEM52BQ4KMG9 183 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 C9orf152Q5JTZ5 239 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ACER2Q5QJU3 275 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TMEM240Q5SV17 173 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 OR5M10Q6IEU7 315 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SLC48A1Q6P1K1 146 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ARL9Q6T311 187 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ESPNLQ6ZVH7 1005 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 NAA40Q86UY6 237 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ARL14Q8N4G2 192 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 KLHL36Q8N4N3 616 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 FAM26EQ8N5C1 309 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 RELL2Q8NC24 303 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 OR2L5Q8NG80 312 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 GNPDA2Q8TDQ7 276 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TCTEX1D2Q8WW35 142 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SLC41A3Q96GZ6 507 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PEX11GQ96HA9 241 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PTCHD1Q96NR3 888 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ABHD1Q96SE0 405 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ZNF559Q9BR84 538 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 FUZQ9BT04 418 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TMEM106CQ9BVX2 250 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SLC17A9Q9BYT1 436 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 OPA3Q9H6K4 179 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PELI2Q9HAT8 420 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CHMP1AQ9HD42 196 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 HINT3Q9NQE9 182 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 EXOSC3Q9NQT5 275 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 NPDC1Q9NQX5 325 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 PHPT1Q9NRX4 125 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 ACSS1Q9NUB1 689 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 TREM2Q9NZC2 230 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 NTMQ9P121 344 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 NDOR1Q9UHB4 597 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 MRPS2Q9Y399 296 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 EXOSC1Q9Y3B2 195 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 LOC390937A0A1W2PQ73 354 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 TMEM218A2RU14 115 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 E9PI62 339 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SLC31A2O15432 143 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 LINC01565O15544 149 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 P2RX6O15547 441 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CHST10O43529 356 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CREBL2O60519 120 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 CLEC3AO75596 197 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 FGF19O95750 216 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 F3P13726 295 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 IFNGR1P15260 489 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CNR1P21554 472 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 NT5EP21589 574 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SMIM11AP58511 58 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SPCS3P61009 180 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PPP1CAP62136 330 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 RNF4P78317 190 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ST3GAL3Q11203 375 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 GPM6BQ13491 265 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 DYRK1AQ13627 763 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 RBMS2Q15434 407 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 RPE65Q16518 533 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 MANEAQ5SRI9 462 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 FAM69AQ5T7M9 428 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 OTPQ5XKR4 325 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 IGF2-ASQ6U949 168 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PARM1Q6UWI2 310 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ADAMTSL4Q6UY14 1074 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 WDR88Q6ZMY6 472 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 C7orf61Q8IZ16 206 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 RFLNBQ8N5W9 214 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 PIGXQ8TBF5 258 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 ALX4Q9H161 411 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 ZSCAN32Q9NX65 697 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 KLHL28Q9NXS3 571 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 CBY1Q9Y3M2 126 aa4.62□□□□□ -1.67
SSR1-202ENST00000397511 SIRT4Q9Y6E7 314 aaPredicted RBP4.62□□□□□ -1.67
SSR1-202ENST00000397511 OR2M5A3KFT3 312 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 FAM221AA4D161 298 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 TRAPPC13A5PLN9 417 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 FAM171A2A8MVW0 826 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 STMND1H3BQB6 276 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 J3QLW9 94 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 IMPA2O14732 288 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 SURF4O15260 269 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 EMC8O43402 210 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 CTSVO60911 334 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 EFCAB14O75071 495 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 KRT33AO76009 404 aa4.61□□□□□ -1.67
SSR1-202ENST00000397511 OR2A4O95047 310 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms