RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 ABLIM2Q6H8Q1 611 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 KRT80Q6KB66 452 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 Q6ZPB1 254 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 LSRQ86X29 649 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 CHERPQ8IWX8 916 aaKnown RBP21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 IQCF1Q8N6M8 205 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 OR4Q3Q8NH05 313 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 ERMAPQ96PL5 475 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 SLX1AQ9BQ83 275 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 TXNIPQ9H3M7 391 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 GRHPRQ9UBQ7 328 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 LRCH1Q9Y2L9 728 aa21.07■□□□□ 0.96
TSPAN4-202ENST00000397396 RIIAD1A6NNX1 92 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 NPIPA2E9PIF3 369 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 NPIPA3F8WFD2 350 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 SMAD9O15198 467 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 AKAP8O43823 692 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 TXNDC12O95881 172 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 F13BP05160 661 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF43P17038 809 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 PTGS2P35354 604 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 PTGER4P35408 488 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 PCYT1AP49585 367 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 HSF1Q00613 529 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 IL5RAQ01344 420 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 POU3F1Q03052 451 aaPredicted RBP21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 PDK3Q15120 406 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 SNAPC1Q16533 368 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 GTF2IRD2BQ6EKJ0 949 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 FCRLAQ7L513 359 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 THAP5Q7Z6K1 395 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 GTF2IRD2Q86UP8 949 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 IGFN1Q86VF2 1251 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 OR8J1Q8NGP2 316 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 SNRNP40Q96DI7 357 aaKnown RBP21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 MUS81Q96NY9 551 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 PRRG4Q9BZD6 226 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 CMC2Q9NRP2 79 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 TVP23BQ9NYZ1 205 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 IER3IP1Q9Y5U9 82 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 MGAQ8IWI9 3026 aa21.06■□□□□ 0.96
TSPAN4-202ENST00000397396 A6NIZ1 184 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 AHRRA9YTQ3 701 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 CYTIPO60759 359 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 GABRA1P14867 456 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF3P17036 446 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 TDGF1P3P51864 188 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 RAP1BP61224 184 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 RAP1AP62834 184 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 ERVK-25P63136 954 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 TEKQ02763 1124 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 ACSM5Q6NUN0 579 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 ADCK1Q86TW2 530 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 GPAT4Q86UL3 456 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 MARVELD2Q8N4S9 558 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 CNBD2Q96M20 576 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 ENKD1Q9H0I2 346 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 FN3KQ9H479 309 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 KLHL9Q9P2J3 617 aa21.05■□□□□ 0.96
TSPAN4-202ENST00000397396 TTLL8A6PVC2 850 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 XKRYO14609 159 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SURF4O15260 269 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 BCL10O95999 233 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 PAICSP22234 425 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 RPL27P61353 136 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 RBPJQ06330 500 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 LY6DQ14210 128 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 PON3Q15166 354 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 RNPS1Q15287 305 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ACKR1Q16570 336 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 PTCHD4Q6ZW05 846 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SLC35D2Q76EJ3 337 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 FAM122BQ7Z309 247 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 JAZF1Q86VZ6 243 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 LSM14AQ8ND56 463 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 RNF128Q8TEB7 428 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF845Q96IR2 970 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ADAD1Q96M93 576 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 UCN2Q96RP3 112 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 TUBA1CQ9BQE3 449 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 B3GAT1Q9P2W7 334 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ZNF407Q9C0G0 2248 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 MED12Q93074 2177 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 FIGNL2A6NMB9 653 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 GPR171O14626 319 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 WDR1O75083 606 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SERPINI2O75830 405 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 CLIC3O95833 236 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 HOXD4P09016 255 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 GNAO1P09471 354 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SLC16A1P53985 500 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SNRPGP62308 76 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 TOP3AQ13472 1001 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 KRR1Q13601 381 aaKnown RBP21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SLC17A1Q14916 467 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 MCEMP1Q8IX19 187 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 ARIH2OSQ8N7S6 290 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 OR9K2Q8NGE7 335 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 TSPAN32Q96QS1 320 aa21.04■□□□□ 0.96
TSPAN4-202ENST00000397396 SNX18Q96RF0 628 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms