RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 FAM174BQ3ZCQ3 159 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 SPANXN4Q5MJ08 99 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 XP32Q5T750 250 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 C1orf140Q5VVS0 124 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 PRAMEF8Q5VWM4 474 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 PRAMEF7Q5VXH5 474 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 NIPAL3Q6P499 406 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 C12orf54Q6X4T0 127 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 DEF8Q6ZN54 512 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF621Q6ZSS3 439 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 SPATA21Q7Z572 469 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ZCCHC24Q8N2G6 241 aaKnown RBP7.57□□□□□ -1.2
CAPN3-208ENST00000397204 OR52P1PQ8NH57 321 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 MFSD8Q8NHS3 518 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 STK35Q8TDR2 534 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 PANX1Q96RD7 426 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 TMPRSS13Q9BYE2 586 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 MS4A5Q9H3V2 200 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 ARMC7Q9H6L4 198 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 RLIMQ9NVW2 624 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 CALML5Q9NZT1 146 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 RCE1Q9Y256 329 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 RAP2CQ9Y3L5 183 aa7.57□□□□□ -1.2
CAPN3-208ENST00000397204 IGHV2OR16-5A0A0B4J2B6 119 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 LOC102725191A0A1B0GVB3 256 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SH3PXD2BA1X283 911 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 FTCDNL1E5RQL4 147 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 E9PBE3 544 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 BIRC5O15392 142 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ITM2AO43736 263 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 TYROBPO43914 113 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SLC43A1O75387 559 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF432O94892 652 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 KRT75O95678 551 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SERPINE1P05121 402 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ADRA2AP08913 450 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 GKN3PP0CG01 181 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF43P17038 809 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 CFPP27918 469 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 IL2RGP31785 369 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ETV4P43268 484 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 RPL14P50914 215 aaKnown RBP7.56□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM33P57088 247 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ABCE1P61221 599 aaKnown RBP7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ROR2Q01974 943 aaKnown RBP7.56□□□□□ -1.2
CAPN3-208ENST00000397204 LGALS3BPQ08380 585 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 IFFO1Q0D2I5 559 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 BNIP2Q12982 314 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 LARS2Q15031 903 aaKnown RBP7.56□□□□□ -1.2
CAPN3-208ENST00000397204 PDCD2Q16342 344 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SLC9B1Q4ZJI4 515 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 LIN52Q52LA3 116 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 LINGO2Q7L985 606 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 GPR137CQ8N3F9 429 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 CADM2Q8N3J6 435 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SVOPLQ8N434 492 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF781Q8N8C0 355 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 CKAP2Q8WWK9 683 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 PPP1R36Q96LQ0 422 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 OXGR1Q96P68 337 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 OR52E6Q96RD3 313 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SNX18Q96RF0 628 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 PLA2G12AQ9BZM1 189 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 DYNLRB1Q9NP97 96 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 CMAHPQ9Y471 501 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 SPEF1Q9Y4P9 236 aa7.56□□□□□ -1.2
CAPN3-208ENST00000397204 A0A0G2JPF8 293 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 HNRNPCL2B2RXH8 293 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 HNRNPCL3B7ZW38 293 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 FRS3O43559 492 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 SPRY1O43609 319 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 SYNGR3O43761 229 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 OR2T1O43869 369 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 HNRNPCL1O60812 293 aaKnown RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 AHSA1O95433 338 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 C1QCP02747 245 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 IGFBP1P08833 259 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 HNRNPCL4P0DMR1 293 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 CREB1P16220 341 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 NCF2P19878 526 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 NR4A1P22736 598 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 COMPP49747 757 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 CLDN17P56750 224 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 UFM1P61960 85 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 TUBA1BP68363 451 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 TUBA4AP68366 448 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 C1DQ13901 141 aaKnown RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 DAG1Q14118 895 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 MAPK11Q15759 364 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 RNF220Q5VTB9 566 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 TUBA1AQ71U36 451 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 NET1Q7Z628 596 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 GLCCI1Q86VQ1 547 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 CLIP4Q8N3C7 705 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-208ENST00000397204 PIK3C3Q8NEB9 887 aa7.55□□□□□ -1.2
CAPN3-208ENST00000397204 ZNF418Q8TF45 676 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms