RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 BOKQ9UMX3 212 aaPredicted RBP13.47□□□□□ -0.25
CAPN3-207ENST00000397200 SF3B6Q9Y3B4 125 aaKnown RBP13.47□□□□□ -0.25
CAPN3-207ENST00000397200 PCDHGB6Q9Y5F9 930 aa13.47□□□□□ -0.25
CAPN3-207ENST00000397200 HTR3EA5X5Y0 456 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF670-ZNF695F2Z2N8 137 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 PGCP20142 388 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 PSMA1P25786 263 aaKnown RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 SUMO3P55854 103 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 ZNF169Q14929 603 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 TIGD3Q6B0B8 471 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 ASB18Q6ZVZ8 466 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 BTLAQ7Z6A9 289 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 CPOQ8IVL8 374 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 OR9Q1Q8NGQ5 310 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 KISS1RQ969F8 398 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 TRMT61AQ96FX7 289 aaKnown RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 SLC19A3Q9BZV2 496 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 PTGES2Q9H7Z7 377 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 MCCC2Q9HCC0 563 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 CHCHD3Q9NX63 227 aaKnown RBP13.46□□□□□ -0.25
CAPN3-207ENST00000397200 IL20RAQ9UHF4 553 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 HRH3Q9Y5N1 445 aa13.46□□□□□ -0.25
CAPN3-207ENST00000397200 TPRP12270 2363 aaKnown RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 PCNX3Q9H6A9 2034 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 APOL3O95236 402 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 SAGP10523 405 aaPredicted RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 SLC2A5P22732 501 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 ETV6P41212 452 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 SLC9A3P48764 834 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 MEOX1P50221 254 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 RPS3AP61247 264 aaKnown RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 COPZ1P61923 177 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 INAQ16352 499 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF362Q5T0B9 420 aaPredicted RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 FADS6Q8N9I5 356 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 FAM98AQ8NCA5 519 aaKnown RBP13.46□□□□□ -0.26
CAPN3-207ENST00000397200 OR2M3Q8NG83 312 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF563Q8TA94 476 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 C3orf49Q96BT1 292 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 ZFP64Q9NPA5 681 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 FBXL2Q9UKC9 423 aa13.46□□□□□ -0.26
CAPN3-207ENST00000397200 CACNA1GO43497 2377 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 A0A075B6Q4 140 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 TRAV27A0A087WT01 109 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 PINLYPA6NC86 204 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CCDC182A6NF36 153 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 B4DXG7 233 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 FAM47E-STBD1D6RA91 191 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CDC40O60508 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CBR3O75828 277 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 GAAP10253 952 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CD40LGP29965 261 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 SLC6A6P31641 620 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 ST3GAL2Q16842 350 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 OR2G6Q5TZ20 316 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 LIPKQ5VXJ0 399 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 ARHGAP11AQ6P4F7 1023 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 Q6ZS92 163 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 RBMXL3Q8N7X1 1067 aaKnown RBP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 OR4F15Q8NGB8 312 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 RNF217Q8TC41 542 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 GPR119Q8TDV5 335 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 GNRHR2Q96P88 292 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 MFRPQ9BY79 579 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF71Q9NQZ8 489 aaPredicted RBP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 ERVK13-1Q9NX77 482 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 RPS6KB2Q9UBS0 482 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 B4GALT7Q9UBV7 327 aa13.45□□□□□ -0.26
CAPN3-207ENST00000397200 MAP1BP46821 2468 aaKnown RBP13.45□□□□□ -0.26
CAPN3-207ENST00000397200 LRRC3CA6NJW4 275 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 FAM183AA6NL82 134 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 PEPDP12955 493 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 SOX6P35712 828 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 ZNF41P51814 821 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-207ENST00000397200 RPS4XP62701 263 aaKnown RBP13.44□□□□□ -0.26
CAPN3-207ENST00000397200 PLGLB1Q02325 96 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 BDH1Q02338 343 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 CRYZQ08257 329 aaKnown RBP13.44□□□□□ -0.26
CAPN3-207ENST00000397200 FOXO1Q12778 655 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 SHFQ7M4L6 423 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 OAFQ86UD1 273 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 LIPHQ8WWY8 451 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 SGTBQ96EQ0 304 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 C1GALT1C1Q96EU7 318 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 KLHDC3Q9BQ90 382 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 TMEM43Q9BTV4 400 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 IFT27Q9BW83 186 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 HCAR1Q9BXC0 346 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 ASPNQ9BXN1 380 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 C12orf10Q9HB07 376 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 FAIMQ9NVQ4 179 aa13.44□□□□□ -0.26
CAPN3-207ENST00000397200 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms