RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 ENTPD5O75356 428 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 ZNF432O94892 652 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 IGF2P01344 180 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 DANCRP0C864 163 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 THRBP10828 461 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 SELENOPP49908 381 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 CDH11P55287 796 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 CLDN17P56750 224 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 PUDPQ08623 228 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 PMS2P3Q13401 168 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 RABL3Q5HYI8 236 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 AGAP6Q5VW22 663 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 CLEC9AQ6UXN8 241 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 YTHDF3Q7Z739 585 aaKnown RBP12.23□□□□□ -0.45
SEC13-204ENST00000397099 PXKQ7Z7A4 578 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 GPR137CQ8N3F9 429 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 C10orf53Q8N6V4 93 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 FAM169BQ8N8A8 192 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 OR2T12Q8NG77 320 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 GPR32P1Q8NGA4 272 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 LILRB1Q8NHL6 650 aaPredicted RBP12.23□□□□□ -0.45
SEC13-204ENST00000397099 ADAMTS16Q8TE57 1224 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 LZICQ8WZA0 190 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 TAMM41Q96BW9 452 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 CMTM5Q96DZ9 223 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 ZNF583Q96ND8 569 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 NSRP1Q9H0G5 558 aaKnown RBP12.23□□□□□ -0.45
SEC13-204ENST00000397099 EFCAB1Q9HAE3 211 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 B3GAT1Q9P2W7 334 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 POU2F3Q9UKI9 436 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 LAMP3Q9UQV4 416 aa12.23□□□□□ -0.45
SEC13-204ENST00000397099 ZANQ9Y493 2812 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 NSD1Q96L73 2696 aaPredicted RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 ARPC4-TTLL3A0A0A6YYG9 625 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 ELOVL7A1L3X0 281 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 OVOL3O00110 214 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 OR6A2O95222 327 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 BGLAPP02818 100 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 OPN1SWP03999 348 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 HIST1H2ABP04908 130 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 RBM34P42696 430 aaKnown RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 ZNF83P51522 516 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 UBE2NP61088 152 aaKnown RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 NPTX1Q15818 432 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 ZNF544Q6NX49 715 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 SLC22A25Q6T423 547 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 HIST3H2AQ7L7L0 130 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 DTX2Q86UW9 622 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 WDR31Q8NA23 367 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 OR1K1Q8NGR3 316 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 OR5J2Q8NH18 312 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 HIST1H2ACQ93077 130 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 ADAD1Q96M93 576 aaKnown RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 Q96MF0 132 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 ZNF426Q9BUY5 554 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 NANSQ9NR45 359 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 NPAP1Q9NZP6 1156 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 ZNF229Q9UJW7 825 aa12.22□□□□□ -0.45
SEC13-204ENST00000397099 FBXO9Q9UK97 447 aaPredicted RBP12.22□□□□□ -0.45
SEC13-204ENST00000397099 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
SEC13-204ENST00000397099 ZNF726A6NNF4 738 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 MS4A18H0YCH9 400 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 M0R1B8 84 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.45
SEC13-204ENST00000397099 OR5F1O95221 314 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 COX4I1P13073 169 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 KDELR2P33947 212 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 ATP5J2P56134 94 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 ROR2Q01974 943 aaKnown RBP12.21□□□□□ -0.45
SEC13-204ENST00000397099 LTBQ06643 244 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 ZP4Q12836 540 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 MS4A18Q3C1V0 323 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 KRTAP21-3Q3LHN1 58 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 HACD2Q6Y1H2 254 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 HDDC2Q7Z4H3 204 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 FBXL14Q8N1E6 418 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 KDM8Q8N371 416 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 IL17RDQ8NFM7 739 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 VANGL1Q8TAA9 524 aaPredicted RBP12.21□□□□□ -0.45
SEC13-204ENST00000397099 HS6ST2Q96MM7 605 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
SEC13-204ENST00000397099 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 KCNS3Q9BQ31 491 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 PRR14Q9BWN1 585 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 SLC7A7Q9UM01 511 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 SH3GLB1Q9Y371 365 aa12.21□□□□□ -0.45
SEC13-204ENST00000397099 H7C1Q1 480 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 PLPP3O14495 311 aa12.2□□□□□ -0.46
SEC13-204ENST00000397099 SMAD7O15105 426 aaKnown RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 CDH2P19022 906 aaPredicted RBP12.2□□□□□ -0.46
SEC13-204ENST00000397099 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms