RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 RAB1BQ9H0U4 201 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 RLIMQ9NVW2 624 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 TMEM45AQ9NWC5 275 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 HIF1ANQ9NWT6 349 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 TREM2Q9NZC2 230 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 FBXO9Q9UK97 447 aaPredicted RBP6.91□□□□□ -1.3
NUP98-206ENST00000397013 SLC9A8Q9Y2E8 581 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
NUP98-206ENST00000397013 LOC105371242A0A075B767 164 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 ERICH4A6NGS2 130 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 OR6C65A6NJZ3 312 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 LIPT2A6NK58 231 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 TMEM114B3SHH9 223 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 H3BQF6 201 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 COPEO14579 308 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 TRIM13O60858 407 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 SEC14L2O76054 403 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 IGLV1-44P01699 117 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 CRYAAP02489 173 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 CHRM4P08173 479 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 KRT16P08779 473 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 KRT4P19013 534 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 NPR2P20594 1047 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 CCT5P48643 541 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 COMPP49747 757 aaPredicted RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 PPOXP50336 477 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 RPS6KA3P51812 740 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 DVL1P1P54792 670 aaPredicted RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 ARF1P84077 181 aaKnown RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 IL1RL1Q01638 556 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 TGFBR3Q03167 851 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 HNRNPA0Q13151 305 aaKnown RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 PHYHD1Q5SRE7 291 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 KRT80Q6KB66 452 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 NIPAL3Q6P499 406 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 KLHL24Q6TFL4 600 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 RNF165Q6ZSG1 346 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 CREB3L2Q70SY1 520 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 TRMT10CQ7L0Y3 403 aaKnown RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 WDFY1Q8IWB7 410 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 ARFGAP2Q8N6H7 521 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 ZNF540Q8NDQ6 660 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 OR4A15Q8NGL6 344 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 WDR60Q8WVS4 1066 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 GCDHQ92947 438 aaPredicted RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 YIPF5Q969M3 257 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 TMEM45BQ96B21 275 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 PPP3R2Q96LZ3 170 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 KATNB1Q9BVA0 655 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 NOX3Q9HBY0 568 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 ESM1Q9NQ30 184 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 MYEF2Q9P2K5 600 aaKnown RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 SLC17A7Q9P2U7 560 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 CRNNQ9UBG3 495 aaPredicted RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 SEC14L4Q9UDX3 406 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
NUP98-206ENST00000397013 SPIN1Q9Y657 262 aaPredicted RBP6.9□□□□□ -1.3
NUP98-206ENST00000397013 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.31
NUP98-206ENST00000397013 IGHV2OR16-5A0A0B4J2B6 119 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 DUXAA6NLW8 204 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 HMGN4O00479 90 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ANKRD28O15084 1053 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ZNF208O43345 1280 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 DNPH1O43598 174 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 LYPLA1O75608 230 aaPredicted RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 KRT33AO76009 404 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 SNUPNO95149 360 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 CHEK2O96017 543 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 PRG2P13727 222 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 CREB1P16220 341 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ADRA2CP18825 462 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 PRPS1L1P21108 318 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 FUT4P22083 530 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 RBMXP38159 391 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 ECI1P42126 302 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 SLC1A3P43003 542 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ALDH3B1P43353 468 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 CLK1P49759 484 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 POLR2HP52434 150 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 NME5P56597 212 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 UBE2NP61088 152 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 LMO4P61968 165 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ROR2Q01974 943 aaKnown RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 MAD2L1BPQ15013 274 aaPredicted RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 MAPK11Q15759 364 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 WHAMMP3Q1A5X7 153 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 ALKBH6Q3KRA9 238 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 GPAT3Q53EU6 434 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 FAHD2BQ6P2I3 314 aaPredicted RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 PAQR6Q6TCH4 344 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 MDP1Q86V88 176 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 POMGNT2Q8NAT1 580 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 KIF18AQ8NI77 898 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 MIPOL1Q8TD10 442 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 CKAP2Q8WWK9 683 aa6.89□□□□□ -1.31
NUP98-206ENST00000397013 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
NUP98-206ENST00000397013 MOAP1Q96BY2 351 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms