RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 MLC1Q15049 377 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SCGB2B2Q4G0G5 96 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 BAIAP2L2Q6UXY1 529 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM64Q6YI46 380 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 OVCH1Q7RTY7 1134 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 HSD17B13Q7Z5P4 300 aaPredicted RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 BEST3Q8N1M1 668 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 OR51D1Q8NGF3 324 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 OR2A1Q8NGT9 310 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 ZPLD1Q8TCW7 415 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 CXorf40AQ8TE69 158 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 OR2A7Q96R45 310 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 LMF1Q96S06 567 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
TRIM39-203ENST00000396547 SLC6A5Q9Y345 797 aa9.02□□□□□ -0.97
TRIM39-203ENST00000396547 IGLON5A6NGN9 336 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 DUXAA6NLW8 204 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GMFGO60234 142 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 DOK2O60496 412 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 CD3DP04234 171 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 CBR1P16152 277 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 PVALBP20472 110 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 NNATQ16517 81 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GUCA2BQ16661 112 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 B3GNTL1Q67FW5 361 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 RAB12Q6IQ22 244 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZCCHC12Q6PEW1 402 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GLB1L2Q8IW92 636 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 RASD2Q96D21 266 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF514Q96K75 400 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 Q96M85 177 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 FOXN4Q96NZ1 517 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 SLITRK2Q9H156 845 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 WDR13Q9H1Z4 485 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 INPP5EQ9NRR6 644 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF223Q9UK11 482 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ATG2BQ96BY7 2078 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 TBC1D3EA0A087X179 549 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 TVP23AA6NH52 213 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 SPINT1O43278 529 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF254O75437 659 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GABRA3P34903 492 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 VASPP50552 380 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 EFNB2P52799 333 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GPR85P60893 370 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 PPP2CBP62714 309 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 PPP2CAP67775 309 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ACTC1P68032 377 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ACTA1P68133 377 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 FLI1Q01543 452 aaPredicted RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 LTBQ06643 244 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GPM6BQ13491 265 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 CSRP2Q16527 193 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 IGSF11Q5DX21 431 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 RPL22L1Q6P5R6 122 aaKnown RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 FIP1L1Q6UN15 594 aaKnown RBP9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZAR1Q86SH2 424 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 NRSN1Q8IZ57 195 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 RAB42Q8N4Z0 105 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 OR4E2Q8NGC2 313 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 NXPE3Q969Y0 559 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 FAM83CQ9BQN1 747 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 ZBP1Q9H171 429 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 EPHX3Q9H6B9 360 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 KCNE5Q9UJ90 142 aa9.01□□□□□ -0.97
TRIM39-203ENST00000396547 GIMAP1-GIMAP5A0A087WTJ2 511 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 KANTRA0A1W2PQU2 76 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 GXYLT2A0PJZ3 443 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM72A0PK05 275 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 MCIDASD6RGH6 385 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 BLOC1S5-TXNDC5H3BN57 136 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OGG1O15527 345 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 PTP4A3O75365 173 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ITGA10O75578 1167 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 WDPCPO95876 746 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ZNF888P0CJ79 500 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 ADRB3P13945 408 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CPN1P15169 458 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 FOSL2P15408 326 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 KCNJ3P48549 501 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CENPAP49450 140 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 UBXN2BQ14CS0 331 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 NKPD1Q17RQ9 610 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OR2L5Q8NG80 312 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 OR10AC1Q8NH08 325 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 MAFAQ8NHW3 353 aaPredicted RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 NR4A3Q92570 626 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 GIMAP5Q96F15 307 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ADAD1Q96M93 576 aaKnown RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 CMSS1Q9BQ75 279 aaKnown RBP9□□□□□ -0.97
TRIM39-203ENST00000396547 DNTTIP1Q9H147 329 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 POFUT1Q9H488 388 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 IFT22Q9H7X7 185 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 EMC3Q9P0I2 261 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 ADAM29Q9UKF5 820 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 EDARQ9UNE0 448 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 CNTRLQ7Z7A1 2325 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 TMEM272A0A1B0GTI8 110 aa9□□□□□ -0.97
TRIM39-203ENST00000396547 C17orf113A0A1B0GUU1 675 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms