RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 A0A1W2PRQ8 180 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 SH3D21A4FU49 640 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 ATP5HO75947 161 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 HIST1H2ABP04908 130 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 ITGA2P17301 1181 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 IGHV1-2P23083 117 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 ERFP50548 548 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 FAPQ12884 760 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 TRAP1Q12931 704 aaKnown RBP17.58■□□□□ 0.41
SNCA-203ENST00000394986 DGCR6Q14129 220 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 SEC23BQ15437 767 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 C9orf135Q5VTT2 229 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 PODNL1Q6PEZ8 512 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 HIST3H2AQ7L7L0 130 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 HIST1H2ACQ93077 130 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 TXNDC15Q96J42 360 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 DHRS1Q96LJ7 313 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 ANKRD19PQ9H560 264 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 MED29Q9NX70 200 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 MALT1Q9UDY8 824 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 KCNN3Q9UGI6 736 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 SLC7A8Q9UHI5 535 aa17.58■□□□□ 0.41
SNCA-203ENST00000394986 LOC102725191A0A1B0GVB3 256 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 BLOC1S5-TXNDC5H3BN57 136 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 RNF13O43567 381 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 OR6A2O95222 327 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 STAMBPO95630 424 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 IGF2P01344 180 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 PSMB1P20618 241 aaKnown RBP17.57■□□□□ 0.4
SNCA-203ENST00000394986 PEX19P40855 299 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 GPR4P46093 362 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 PCYT1AP49585 367 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 RASSF2P50749 326 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 SFRP5Q5T4F7 317 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 NHLRC1Q6VVB1 395 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 MBOAT2Q6ZWT7 520 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 ZC3HAV1LQ96H79 300 aaKnown RBP17.57■□□□□ 0.4
SNCA-203ENST00000394986 MED18Q9BUE0 208 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 EMC6Q9BV81 110 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 ACTR6Q9GZN1 396 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 LRMDAQ9H2I8 198 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 SLCO5A1Q9H2Y9 848 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 FANCFQ9NPI8 374 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 POMPQ9Y244 141 aa17.57■□□□□ 0.4
SNCA-203ENST00000394986 COX5AP20674 150 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 RRM2P31350 389 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 DNAJA1P31689 397 aaKnown RBP17.56■□□□□ 0.4
SNCA-203ENST00000394986 AQP2P41181 271 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 PRKCDQ05655 676 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 RPL18Q07020 188 aaKnown RBP17.56■□□□□ 0.4
SNCA-203ENST00000394986 ITGADQ13349 1161 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 FLOT2Q14254 428 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 CARD17Q5XLA6 110 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 PXKQ7Z7A4 578 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 MOSPD2Q8NHP6 518 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 FAM222BQ8WU58 562 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 KISS1RQ969F8 398 aaPredicted RBP17.56■□□□□ 0.4
SNCA-203ENST00000394986 S100PBPQ96BU1 408 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 ALKBH3Q96Q83 286 aaPredicted RBP17.56■□□□□ 0.4
SNCA-203ENST00000394986 TRIM15Q9C019 465 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 ASB6Q9NWX5 421 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 UPB1Q9UBR1 384 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 NDRG3Q9UGV2 375 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 GPR52Q9Y2T5 361 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 NOX1Q9Y5S8 564 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 FREM1Q5H8C1 2179 aa17.56■□□□□ 0.4
SNCA-203ENST00000394986 UPK3AO75631 287 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 ZNF432O94892 652 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 GADD45GO95257 159 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 SAGP10523 405 aaPredicted RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 EPXP11678 715 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 IFNGR1P15260 489 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 IL32P24001 234 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 MAGEA2P43356 314 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 ZP4Q12836 540 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 P2RY6Q15077 328 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 CCDC121Q6ZUS5 278 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 LINGO2Q7L985 606 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 BHLHA15Q7RTS1 189 aaPredicted RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 SPATA24Q86W54 205 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 ADGRG5Q8IZF4 528 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 RNF113BQ8IZP6 322 aaKnown RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 OR4K5Q8NGD3 323 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 OR13C2Q8NGS9 318 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 LIPHQ8WWY8 451 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 FAM46AQ96IP4 442 aaKnown RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 DACH2Q96NX9 599 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 OR2M2Q96R28 347 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 FUZQ9BT04 418 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 MAGIXQ9H6Y5 334 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 RCE1Q9Y256 329 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 FBN2P35556 2912 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 TRAV27A0A087WT01 109 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 EFCAB9A8MZ26 197 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 PDLIM1O00151 329 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 CDC42EP2O14613 210 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 RAD51DO75771 328 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 CNOT4O95628 575 aaKnown RBP17.55■□□□□ 0.4
SNCA-203ENST00000394986 F13BP05160 661 aa17.55■□□□□ 0.4
SNCA-203ENST00000394986 THBDP07204 575 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms