RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GLULP15104 373 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 AP3S2P59780 193 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 RPS15P62841 145 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ERVK-25P63136 954 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 RPL6Q02878 288 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 ILF3Q12906 894 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 OLFML2AQ68BL7 652 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 SLC25A25Q6KCM7 469 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 KIAA1324Q6UXG2 1013 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 OR6V1Q8N148 313 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 BAHD1Q8TBE0 780 aaPredicted RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 SYNPRQ8TBG9 265 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 HMGB4Q8WW32 186 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 MRPL48Q96GC5 212 aaKnown RBP16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 WDR92Q96MX6 357 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 MGAT4CQ9UBM8 478 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 POMT2Q9UKY4 750 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 MMP17Q9ULZ9 603 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 MAB21L2Q9Y586 359 aa16.76■□□□□ 0.27
PCDHA1-202ENST00000394633 DMDP11532 3685 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 A0A1B0GVT2 93 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 C4orf47A7E2U8 309 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 OR10H2O60403 315 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 SLC35E2P0CK97 266 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 P2RX1P51575 399 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF684Q5T5D7 378 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 FAAP20Q6NZ36 180 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 TMEM65Q6PI78 240 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 GLDNQ6ZMI3 551 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 MSANTD3Q96H12 275 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 TSPAN10Q9H1Z9 355 aaPredicted RBP16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 NOX3Q9HBY0 568 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 CA10Q9NS85 328 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 DTX4Q9Y2E6 619 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 KNL1Q8NG31 2342 aa16.75■□□□□ 0.27
PCDHA1-202ENST00000394633 A0A087WUJ7 227 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 FAM171A2A8MVW0 826 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 HRKO00198 91 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SULT1B1O43704 296 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 OR7A10O76100 309 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 ALDOBP05062 364 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 GABRG2P18507 467 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 GPR143P51810 404 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SRSF5Q13243 272 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 OPCMLQ14982 345 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 MFSD13AQ14CX5 517 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 LINC00303Q3SY05 128 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 LINC01590Q5TEZ4 76 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 RNF44Q7L0R7 432 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SLC35F3Q8IY50 421 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 EID2Q8N6I1 236 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 CSNK1A1LQ8N752 337 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SPERTQ8NA61 448 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 PATE1Q8WXA2 126 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 FBXL3Q9UKT7 428 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 LRP4O75096 1905 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SPEGQ15772 3267 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 NPIPB9F8W1W9 429 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 ARPC3O15145 178 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 HCRTR1O43613 425 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 RDH16O75452 317 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 RAB38P57729 211 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 RAB14P61106 215 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 DHODHQ02127 395 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF141Q15928 474 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 TMEM69Q5SWH9 247 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SPICQ8N5J4 248 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 C1orf216Q8TAB5 229 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 S100A16Q96FQ6 103 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 BMFQ96LC9 184 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 GSX2Q9BZM3 304 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 FKRPQ9H9S5 495 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 FBRSQ9HAH7 460 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF346Q9UL40 294 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 FKBP7Q9Y680 259 aa16.74■□□□□ 0.27
PCDHA1-202ENST00000394633 SPTBP11277 2137 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 A0A1W2PPL8 197 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 FOXS1O43638 330 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 GLCEO94923 617 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 GUSBP08236 651 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 CXCL2P19875 107 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ANXA7P20073 488 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 CDK2P24941 298 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 DCTDP32321 178 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 TPMTP51580 245 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 STX4Q12846 297 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 NPSR1Q6W5P4 371 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 KANSL1Q7Z3B3 1105 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 MOSPD2Q8NHP6 518 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF224Q9NZL3 707 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 PCDHGA5Q9Y5G8 931 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 NUP210LQ5VU65 1888 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 PLSCR5A0PG75 271 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 SERPINI2O75830 405 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 RAB40ALP0C0E4 278 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 CALCBP10092 127 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF267Q14586 743 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms