RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 MINDY2Q8NBR6 621 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 NAT6Q93015 286 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 TMCO6Q96DC7 493 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 SYT4Q9H2B2 425 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 TAS2R10Q9NYW0 307 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 TRAPPC4Q9Y296 219 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 NOX1Q9Y5S8 564 aa13.65□□□□□ -0.22
GPC3-202ENST00000394299 A0A1W2PQ09 198 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 IDH3BO43837 385 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 SLC25A12O75746 678 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 CELA2AP08217 269 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 SLC2A2P11168 524 aaPredicted RBP13.64□□□□□ -0.23
GPC3-202ENST00000394299 SIRPAP78324 504 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 SIGLEC14Q08ET2 396 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
GPC3-202ENST00000394299 CDONQ4KMG0 1287 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 AGAP7PQ5VUJ5 663 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 PM20D2Q8IYS1 436 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 TMEM105Q8N8V8 129 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 POMGNT2Q8NAT1 580 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 OIT3Q8WWZ8 545 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 THAP4Q8WY91 577 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 SP140LQ9H930 580 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 WDR76Q9H967 626 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 COL5A1P20908 1838 aaPredicted RBP13.64□□□□□ -0.23
GPC3-202ENST00000394299 TRAV36DV7A0A075B6V5 113 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 A0A1B0GTH9 108 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 MASP2O00187 686 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 RPP14O95059 124 aaKnown RBP13.64□□□□□ -0.23
GPC3-202ENST00000394299 PAHP00439 452 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 CSF3P09919 207 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 PSKH1P11801 424 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 LCN1P31025 176 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 ISXQ2M1V0 245 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 SLC25A35Q3KQZ1 300 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 PYDC2Q56P42 97 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 NRARPQ7Z6K4 114 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 ARL5BQ96KC2 179 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 CCDC32Q9BV29 185 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 FKRPQ9H9S5 495 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 B3GAT2Q9NPZ5 323 aa13.64□□□□□ -0.23
GPC3-202ENST00000394299 KIF26BQ2KJY2 2108 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 MED12Q93074 2177 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 TRBV2A0A0J9YWF9 115 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 SC5DO75845 299 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 OR2J2O76002 312 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 IGF2P01344 180 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 OPN1LWP04000 364 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 HLA-DOBP13765 273 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 EDNRAP25101 427 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 NANOS3P60323 173 aaKnown RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 RPS11P62280 158 aaKnown RBP eCLIP13.63□□□□□ -0.23
GPC3-202ENST00000394299 CDC20Q12834 499 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 CDK5R1Q15078 307 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 LCN1P1Q5VSP4 162 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 AP3S1Q92572 193 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 RNF166Q96A37 237 aaPredicted RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 KCNN2Q9H2S1 579 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 CELSR3Q9NYQ7 3312 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 A0A0B4J203 849 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 D6RAR5 112 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 H3BSH0 61 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 OGG1O15527 345 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 NPIPB7O75200 414 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 ATP6V1G1O75348 118 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 OR8G3PP0DMU2 310 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 F8A1P23610 371 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 MTNR1BP49286 362 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 GBX2P52951 348 aaPredicted RBP13.63□□□□□ -0.23
GPC3-202ENST00000394299 FOXK1P85037 733 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 ETFDHQ16134 617 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 SLC35D3Q5M8T2 416 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 C1orf140Q5VVS0 124 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 SLC6A19Q695T7 634 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 HGDQ93099 445 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 C12orf10Q9HB07 376 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 TMEM165Q9HC07 324 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 RXFP3Q9NSD7 469 aa13.63□□□□□ -0.23
GPC3-202ENST00000394299 BDP1A6H8Y1 2624 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 AKR7A3O95154 331 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 RFX2P48378 723 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 SLC26A5P58743 744 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 MELKQ14680 651 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 ACKR1Q16570 336 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 PEAR1Q5VY43 1037 aaPredicted RBP13.62□□□□□ -0.23
GPC3-202ENST00000394299 MRPL14Q6P1L8 145 aaKnown RBP13.62□□□□□ -0.23
GPC3-202ENST00000394299 PXKQ7Z7A4 578 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 WDFY1Q8IWB7 410 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 OR10G3Q8NGC4 313 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 ADAD1Q96M93 576 aaKnown RBP13.62□□□□□ -0.23
GPC3-202ENST00000394299 OR14A2Q96R54 314 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 RASD1Q9Y272 281 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 SLC6A5Q9Y345 797 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 NCOR1O75376 2440 aa13.62□□□□□ -0.23
GPC3-202ENST00000394299 A0A0G2JK05 382 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms