RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 NDC1Q9BTX1 674 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 PCED1AQ9H1Q7 454 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 PELI2Q9HAT8 420 aa10.21□□□□□ -0.78
CUX1-204ENST00000393824 GPN3Q9UHW5 284 aaPredicted RBP10.21□□□□□ -0.78
CUX1-204ENST00000393824 SNRNP200O75643 2136 aaKnown RBP10.2□□□□□ -0.78
CUX1-204ENST00000393824 FXYD6-FXYD2A0A087WZ82 144 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 A0A1W2PPV9 198 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 DAPL1A0PJW8 107 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 ANKRD20A5PA0PJZ0 165 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 PMS2P1A4D2B8 440 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 KLF4O43474 513 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 NDUFB6O95139 128 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 SLC2A10O95528 541 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 ALPPL2P10696 532 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 MYF5P13349 255 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 F3P13726 295 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 ANXA7P20073 488 aaKnown RBP10.2□□□□□ -0.78
CUX1-204ENST00000393824 AFF3P51826 1226 aaKnown RBP10.2□□□□□ -0.78
CUX1-204ENST00000393824 ARFIP1P53367 373 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 H2BFSP57053 126 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 DCDP81605 110 aaKnown RBP10.2□□□□□ -0.78
CUX1-204ENST00000393824 SLC3A1Q07837 685 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 HES5Q5TA89 166 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 PRAMEF13Q5VWM6 474 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 DMKNQ6E0U4 476 aaPredicted RBP10.2□□□□□ -0.78
CUX1-204ENST00000393824 DCUN1D3Q8IWE4 304 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 CMTM4Q8IZR5 234 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 OR6S1Q8NH40 331 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 OR52I2Q8NH67 350 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 PIGXQ8TBF5 258 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 ASB13Q8WXK3 278 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 MS4A8Q9BY19 250 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 FXYD6Q9H0Q3 95 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 UCK1Q9HA47 277 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 KLHL9Q9P2J3 617 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 PILRBQ9UKJ0 227 aa10.2□□□□□ -0.78
CUX1-204ENST00000393824 FLRT2O43155 660 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 EIF4E2O60573 245 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 EIF1BO60739 113 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 KRT33AO76009 404 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SPDEFO95238 335 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SERPINA3P01011 423 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 IGF2P01344 180 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 TNFP01375 233 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SP9P0CG40 484 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 EIF1P41567 113 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 NRG3P56975 720 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 MEF2AQ02078 507 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 ILF3Q12906 894 aaKnown RBP eCLIP10.19□□□□□ -0.784e-7■■■■□ 21.7
CUX1-204ENST00000393824 SHBQ15464 509 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 MPPED2Q15777 294 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 LRRN1Q6UXK5 716 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 TMEM64Q6YI46 380 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 ZNF620Q6ZNG0 422 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 BEND4Q6ZU67 534 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 PGAP1Q75T13 922 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 MEPCEQ7L2J0 689 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 LINGO2Q7L985 606 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 TAF8Q7Z7C8 310 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 STX12Q86Y82 276 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SVBPQ8N300 66 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 TMEM99Q8N816 258 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 RELL2Q8NC24 303 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 C17orf47Q8NEP4 570 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 OR2T33Q8NG76 320 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 NANPQ8TBE9 248 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SFXN5Q8TD22 340 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 BRIX1Q8TDN6 353 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 SLC37A2Q8TED4 501 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 GLYATL2Q8WU03 294 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SFT2D1Q8WV19 159 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 XAGE5Q8WWM1 108 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 OR1F2PQ96R84 312 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 GAL3ST1Q99999 423 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 IL21RQ9HBE5 538 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SPHK1Q9NYA1 384 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 ZMIZ1Q9ULJ6 1067 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SGCEO43556 437 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 GP1BAP07359 652 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 UBBP0CG47 229 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 UBCP0CG48 685 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 MGMTP16455 207 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 PVALBP20472 110 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 CNR1P21554 472 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 PEBP1P30086 187 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 TAS2R41P59536 307 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 RPS27AP62979 156 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 ST3GAL3Q11203 375 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 HSPB3Q12988 150 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SERTAD2Q14140 314 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 MELKQ14680 651 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 DEFB133Q30KQ1 61 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 DHRS7BQ6IAN0 325 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 NIPAL3Q6P499 406 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 HAGHLQ6PII5 290 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 OVCH1Q7RTY7 1134 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 IZUMO1Q8IYV9 350 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms