RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 PRDM4Q9UKN5 801 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 RCE1Q9Y256 329 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 PMF1-BGLAPU3KQ54 211 aa14.41□□□□□ -0.1
PTPRK-208ENST00000392449 AIM2O14862 343 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 FZD7O75084 574 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SLC43A1O75387 559 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 F12P00748 615 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 IGLV1-44P01699 117 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 CRYAAP02489 173 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 OR4A8P0C604 315 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SLC25A16P16260 332 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 ZNF16P17020 682 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SERPINF1P36955 418 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 IDH3GP51553 393 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 RGS8P57771 180 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 HGFACQ04756 655 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SELPLGQ14242 412 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 CARTPTQ16568 116 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 DLEU7Q6UYE1 221 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 TMEM123Q8N131 208 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SMYD1Q8NB12 490 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 SLC38A4Q969I6 547 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 ATP6V1G3Q96LB4 118 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 MOGAT1Q96PD6 335 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 VRK1Q99986 396 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 C12orf10Q9HB07 376 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 CRLF2Q9HC73 371 aa14.4□□□□□ -0.1
PTPRK-208ENST00000392449 CRNNQ9UBG3 495 aaPredicted RBP14.4□□□□□ -0.1
PTPRK-208ENST00000392449 TRAV36DV7A0A075B6V5 113 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 OR6C65A6NJZ3 312 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 MS4A18H0YCH9 400 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 M0R3G1 203 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 M0R3H8 397 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 BGLAPP02818 100 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 OPN1SWP03999 348 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 IGHV4-31P0DP07 118 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 BMP4P12644 408 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 GPX2P18283 190 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 NCALDP61601 193 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 SNRPD2P62316 118 aaKnown RBP14.39□□□□□ -0.11
PTPRK-208ENST00000392449 VLDLRP98155 873 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 NPRL3Q12980 569 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 GGTLC2Q14390 218 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 OR1Q1Q15612 314 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 MS4A18Q3C1V0 323 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 H1FNTQ75WM6 255 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-208ENST00000392449 SLC46A3Q7Z3Q1 461 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 KRT73Q86Y46 540 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 GPR137CQ8N3F9 429 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 MAGEE2Q8TD90 523 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-208ENST00000392449 DNAJA4Q8WW22 397 aaPredicted RBP14.39□□□□□ -0.11
PTPRK-208ENST00000392449 TXNDC15Q96J42 360 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 MED29Q9NX70 200 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 TESQ9UGI8 421 aaKnown RBP14.39□□□□□ -0.11
PTPRK-208ENST00000392449 MALRD1Q5VYJ5 2156 aa14.39□□□□□ -0.11
PTPRK-208ENST00000392449 A0A087WUJ7 227 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 A0A0B4J2E0 115 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 A0A1B0GX12 115 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 RPL36A-HNRNPH2H7BZ11 118 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 OR2T1O43869 369 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 IGKV3-15P01624 115 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 NQO1P15559 274 aaKnown RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 USF1P22415 310 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 PPIBP23284 216 aaKnown RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SLC6A2P23975 617 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 CAPZA2P47755 286 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 CDH12P55289 794 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SH3BGRP55822 239 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SQLEQ14534 574 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 CHRFAM7AQ494W8 412 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 C1QTNF12Q5T7M4 302 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 ULK3Q6PHR2 472 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 MDP1Q86V88 176 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 PTOV1Q86YD1 416 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 ARMC8Q8IUR7 673 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 ZCCHC24Q8N2G6 241 aaKnown RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 ARIH2OSQ8N7S6 290 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 DYDC1Q8WWB3 177 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SPATA5L1Q9BVQ7 753 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 TMEM38AQ9H6F2 299 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 NOX3Q9HBY0 568 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 VWC2LB2RUY7 222 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SERPINI2O75830 405 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 MFN2O95140 757 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 THBS4P35443 961 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 MTPNP58546 118 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 POU3F1Q03052 451 aaPredicted RBP14.38□□□□□ -0.11
PTPRK-208ENST00000392449 RUNDC3AQ59EK9 446 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 RETREG3Q86VR2 466 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 UEVLDQ8IX04 471 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 SLC47A1Q96FL8 570 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 FOXN4Q96NZ1 517 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 KCNK17Q96T54 332 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 GMEB1Q9Y692 573 aa14.38□□□□□ -0.11
PTPRK-208ENST00000392449 FBN3Q75N90 2809 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 IGHV2OR16-5A0A0B4J2B6 119 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 EVPLLA8MZ36 301 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 HLA-HP01893 362 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 CSF3P09919 207 aa14.37□□□□□ -0.11
PTPRK-208ENST00000392449 CBR1P16152 277 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms