RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 YES1P07947 543 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 OR2T7P0C7T2 308 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 NR2C1P13056 603 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 KIR2DL3P43628 341 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 E2F1Q01094 437 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 RBMS2Q15434 407 aaKnown RBP8.83□□□□□ -1
COL6A3-204ENST00000392003 VASNQ6EMK4 673 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 OR2T27Q8NH04 317 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 C16orf52Q8NHV5 167 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 NPAS1Q99742 590 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 TMEM43Q9BTV4 400 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 ZNF426Q9BUY5 554 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 ZNF768Q9H5H4 540 aaKnown RBP8.83□□□□□ -1
COL6A3-204ENST00000392003 LRIT1Q9P2V4 623 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 RASD1Q9Y272 281 aa8.83□□□□□ -1
COL6A3-204ENST00000392003 E9PI62 339 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 HRKO00198 91 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 ORC5O43913 435 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 HIST1H1CP16403 213 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 ELK1P19419 428 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 MAOAP21397 527 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 NAA10P41227 235 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 CAPZBP47756 277 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 CXCL12P48061 93 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 PUDPQ08623 228 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 BIKQ13323 160 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 AANATQ16613 207 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 TP53I3Q53FA7 332 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 C17orf107Q6ZR85 190 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 OR8H3Q8N146 312 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 BCORP1Q8N888 145 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 VRK1Q99986 396 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 PAPOLGQ9BWT3 736 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 TTTY10Q9BZA0 68 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 NUFIP1Q9UHK0 495 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 SERTAD3Q9UJW9 196 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 FBXL4Q9UKA2 621 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 ZNF337Q9Y3M9 751 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 ABCA7Q8IZY2 2146 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 DBX1A6NMT0 343 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 TMEM150CB9EJG8 249 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 GPR37O15354 613 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 HRO43593 1189 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 RAB3BP20337 219 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 RIDAP52758 137 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 ZNF85Q03923 595 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SRSF5Q13243 272 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 SFXN4Q6P4A7 337 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 NPSR1Q6W5P4 371 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 DPY19L2P2Q6ZN68 376 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 COMMD7Q86VX2 200 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SLC35F2Q8IXU6 374 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 OR51L1Q8NGJ5 315 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 OR6K6Q8NGW6 343 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 OR51Q1Q8NH59 317 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 PHOSPHO1Q8TCT1 267 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SLC7A6Q92536 515 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 GHSRQ92847 366 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 ZNF285Q96NJ3 590 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SOSTQ9BQB4 213 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 DIABLOQ9NR28 239 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 MBD2Q9UBB5 411 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 NLKQ9UBE8 527 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 MRTO4Q9UKD2 239 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 CLCA3PQ9Y6N3 262 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 A0A087WUJ7 227 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 OR6C70A6NIJ9 312 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 LDLRAD4O15165 306 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 HLA-DQB1P01920 261 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SLC2A5P22732 501 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 EDNRAP25101 427 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 GPR3P46089 330 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 PRPS1P60891 318 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 RAB14P61106 215 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 IGLV3-21P80748 117 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 PLAURQ03405 335 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 NDUFAF6Q330K2 333 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 Q7L0L9 218 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 LSRQ86X29 649 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 GHDCQ8N2G8 530 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SMAP2Q8WU79 429 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 SENP5Q96HI0 755 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 LINC00052Q96N35 136 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 SMAD5Q99717 465 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 PNO1Q9NRX1 252 aaKnown RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 SLC22A11Q9NSA0 550 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 GNG8Q9UK08 70 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 COLQQ9Y215 455 aaPredicted RBP8.82□□□□□ -1
COL6A3-204ENST00000392003 PRUNE2Q8WUY3 3088 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 XIRP2A4UGR9 3374 aa8.82□□□□□ -1
COL6A3-204ENST00000392003 LILRA5A6NI73 299 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 SHISA7A6NL88 538 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 SCDO00767 359 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 DCNP07585 359 aaKnown RBP8.81□□□□□ -1
COL6A3-204ENST00000392003 NGFRP08138 427 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 PNMTP11086 282 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 RAC2P15153 192 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 NME1P15531 152 aaKnown RBP8.81□□□□□ -1
COL6A3-204ENST00000392003 RAB3AP20336 220 aa8.81□□□□□ -1
COL6A3-204ENST00000392003 FASLGP48023 281 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms