RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SPPL2BQ8TCT7 592 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CORO2AQ92828 525 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 UBE2E3Q969T4 207 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CPNE4Q96A23 557 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CLDN23Q96B33 292 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPS24Q96EL2 167 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GALNT14Q96FL9 552 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 AURKBQ96GD4 344 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SMIM10Q96HG1 83 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM41AQ96HV5 264 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HPDLQ96IR7 371 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ITCHQ96J02 903 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CAPNS2Q96L46 248 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 UBXN10Q96LJ8 280 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 UBE2E2Q96LR5 201 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf74Q96LT6 269 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GDAP1L1Q96MZ0 367 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR82Q96P67 336 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TSPAN32Q96QS1 320 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR2A14Q96R47 310 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 INPP5KQ9BT40 448 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RSG1Q9BU20 258 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SPATA16Q9BXB7 569 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 NFKBIZQ9BYH8 718 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC2A11Q9BYW1 496 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RHOBTB2Q9BYZ6 727 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FTOQ9C0B1 505 aaKnown RBP eCLIP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 POLR1EQ9GZS1 481 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CHST5Q9GZS9 411 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 AICDAQ9GZX7 198 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SPATC1LQ9H0A9 340 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 DEFB127Q9H1M4 99 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC26A1Q9H2B4 701 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OR52D1Q9H346 318 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SNX25Q9H3E2 840 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C5orf66Q9H5L9 145 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 OPA3Q9H6K4 179 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CAB39LQ9H9S4 337 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SCPEP1Q9HB40 452 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC25A19Q9HC21 320 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PROK2Q9HC23 129 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SLCO1B3Q9NPD5 702 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 EQTNQ9NQ60 294 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MEPEQ9NQ76 525 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 INIPQ9NRY2 104 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HOMER2Q9NSB8 354 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RRP7BPQ9NSQ0 103 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 C20orf96Q9NUD7 363 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SMOXQ9NWM0 555 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RRN3Q9NYV6 651 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 PDP1Q9P0J1 537 aaPredicted RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 P2RX2Q9UBL9 471 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 LHX3Q9UBR4 397 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FETUBQ9UGM5 382 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 KIF25Q9UIL4 384 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ANAPC5Q9UJX4 755 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 FEM1BQ9UK73 627 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 SARDHQ9UL12 918 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 CDH7Q9ULB5 785 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ACOT9Q9Y305 439 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MEMO1Q9Y316 297 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HYOU1Q9Y4L1 999 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TRPV2Q9Y5S1 764 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPL42Q9Y6G3 142 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 RPS6KL1Q9Y6S9 549 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPE1-MOB4S4R3N1 261 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 TNRC6AQ8NDV7 1962 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 STRCP1A6NGW2 1772 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 AHCTF1Q8WYP5 2266 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 MDC1Q14676 2089 aaKnown RBP-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 HEG1Q9ULI3 1381 aa-0.58□□□□□ -2.5
TRAJ28-201ENST00000390509 ARAP3Q8WWN8 1544 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRK2Q5S007 2527 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 UBN2Q6ZU65 1347 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TRIP11Q15643 1979 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 DENND4BO75064 1496 aaPredicted RBP-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CHD4Q14839 1912 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV3-64A0A075B6Q5 118 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TRAV18A0A075B6X5 111 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 MEIKINA0A087WXM9 373 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV1OR21-1A0A087WYE8 117 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A0B4J203 849 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV7-4-1A0A0J9YVY3 117 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LOC100131303A0A0U1RQF7 123 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00854A0A1B0GVQ3 168 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1W2PPQ1 181 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1W2PQF6 199 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1W2PR77 199 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 A0A1W2PRG6 482 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 CIB4A0PJX0 185 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LNP1A1A4G5 178 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LRIT2A6NDA9 550 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 SAGE2PA6NJ88 616 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC72A6NJI9 287 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 C12orf71A8MTZ7 269 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 C17orf98A8MV24 154 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM150CB9EJG8 249 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 H3BQ85 93 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 J3QQQ9 107 aa-0.59□□□□□ -2.5
TRAJ28-201ENST00000390509 M0R378 163 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms