RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 BCORQ6W2J9 1755 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SBNO1A3KN83 1393 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 RREB1Q92766 1687 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 IGHV1OR15-1A0A075B7D0 117 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 IGHV1-45A0A0A0MS14 117 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 C15orf38-AP3S2A0A0A6YYH1 394 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 IGHV3OR16-9A0A0B4J2B5 98 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 LOC100131303A0A0U1RQF7 123 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GMNCA6NCL1 334 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 A8MTW9 85 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 EIF3CLB5ME19 914 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PTGES3LE9PB15 166 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 LMO7DNF2Z398 122 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 F5H423 210 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 F6UB75 175 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 INMT-MINDY4F8WBC2 141 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 DCTN6O00399 190 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC31A2O15432 143 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 RNF113AO15541 343 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 DKC1O60832 514 aaKnown RBP eCLIP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TADA2AO75478 443 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 UGT2B17O75795 530 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TRIM16O95361 564 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GNA14O95837 355 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ANGPTL1O95841 491 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 KRT18P05783 430 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SNRPAP09012 282 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CT45A10P0DMU9 189 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLUP10909 449 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ETS2P15036 469 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 NCK1P16333 377 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF3P17036 446 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PSMC3P17980 439 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GPX2P18283 190 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ABCB4P21439 1286 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 HTR1DP28221 377 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GNALP38405 381 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 P2RX1P51575 399 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 RAP1GDS1P52306 607 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 UGT2B15P54855 530 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 MFAP2P55001 183 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 F2RL1P55085 397 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 EVCP57679 992 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 KLF3P57682 345 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FGF12P61328 243 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 RBP5P82980 135 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 KLF5Q13887 457 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GNMTQ14749 295 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLPPQ16740 277 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC5A12Q1EHB4 618 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ALKBH6Q3KRA9 238 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 LINC01554Q52M75 96 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CMPK2Q5EBM0 449 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR2B11Q5JQS5 317 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMEM255AQ5JRV8 349 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 LIN9Q5TKA1 542 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLX4IPQ5VYV7 408 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 IZUMO3Q5VZ72 239 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF660Q6AZW8 331 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ELP2Q6IA86 826 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZFP1Q6P2D0 407 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SCYL2Q6P3W7 929 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC22A25Q6T423 547 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLEC4GQ6UXB4 293 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FRA10AC1Q70Z53 315 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 STRADAQ7RTN6 431 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ZNF571Q7Z3V5 609 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TMPRSS11BQ86T26 416 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PPP1R27Q86WC6 154 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CRLF3Q8IUI8 442 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PCP2Q8IVA1 136 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SMAP1Q8IYB5 467 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SYTL1Q8IYJ3 562 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 HSD17B11Q8NBQ5 300 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CLEC1AQ8NC01 280 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR2T33Q8NG76 320 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR10S1Q8NGN2 331 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 OR52N1Q8NH53 320 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC7A13Q8TCU3 470 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 LIPHQ8WWY8 451 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FCGR1BQ92637 280 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TSR2Q969E8 191 aaKnown RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 MUCL1Q96DR8 90 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PGAP3Q96FM1 320 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 C5orf30Q96GV9 206 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ERO1AQ96HE7 468 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 PCED1BQ96HM7 432 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 ITCHQ96J02 903 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 CCDC136Q96JN2 1154 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 MBOAT7Q96N66 472 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TESK2Q96S53 571 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 COQ7Q99807 217 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 SLC6A7Q99884 636 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 RHOXF2Q9BQY4 288 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 HCAR1Q9BXC0 346 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TBC1D10AQ9BXI6 508 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 TWSG1Q9GZX9 223 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 GTSF1LQ9H1H1 148 aa-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 FNDC4Q9H6D8 234 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-540P-201ENST00000384622 POPDC2Q9HBU9 364 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms