RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 MAL2Q969L2 176 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 KTI12Q96EK9 354 aaPredicted RBP22.95■■□□□ 1.26
NPHP3-202ENST00000383282 RAB1BQ9H0U4 201 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 CHODLQ9H9P2 273 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 USH1CQ9Y6N9 552 aa22.95■■□□□ 1.26
NPHP3-202ENST00000383282 ZNF432O94892 652 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 IGKV3-15P01624 115 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 ERCC1P07992 297 aaPredicted RBP22.94■■□□□ 1.26
NPHP3-202ENST00000383282 SRD5A1P18405 259 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 CALCRP30988 508 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 STX1BP61266 288 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 ARF1P84077 181 aaKnown RBP22.94■■□□□ 1.26
NPHP3-202ENST00000383282 IL1RL1Q01638 556 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 FAM69AQ5T7M9 428 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 C6orf89Q6UWU4 347 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 MAVSQ7Z434 540 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 FOXN4Q96NZ1 517 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 PAIP1Q9H074 479 aaKnown RBP22.94■■□□□ 1.26
NPHP3-202ENST00000383282 NELFAQ9H3P2 528 aa22.94■■□□□ 1.26
NPHP3-202ENST00000383282 ARFGEF3Q5TH69 2177 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 BMP2P12643 396 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 ETS2P15036 469 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 CBR1P16152 277 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 HNF1AP20823 631 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 IGFBP5P24593 272 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 PRKAR1BP31321 381 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 THBS2P35442 1172 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 MDH1P40925 334 aaKnown RBP22.93■■□□□ 1.26
NPHP3-202ENST00000383282 IDH3GP51553 393 aaPredicted RBP22.93■■□□□ 1.26
NPHP3-202ENST00000383282 SLC2A7Q6PXP3 512 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 NET1Q7Z628 596 aaPredicted RBP22.93■■□□□ 1.26
NPHP3-202ENST00000383282 ARIH2OSQ8N7S6 290 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 PIK3C3Q8NEB9 887 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 DNAJA4Q8WW22 397 aaPredicted RBP22.93■■□□□ 1.26
NPHP3-202ENST00000383282 PRR14Q9BWN1 585 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 ZNF442Q9H7R0 627 aa22.93■■□□□ 1.26
NPHP3-202ENST00000383282 M0R082 166 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 VIMP08670 466 aaKnown RBP22.92■■□□□ 1.26
NPHP3-202ENST00000383282 CCDC36Q8IYA8 594 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 LSMEM1Q8N8F7 131 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 ZNF417Q8TAU3 575 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 MSI2Q96DH6 328 aaKnown RBP22.92■■□□□ 1.26
NPHP3-202ENST00000383282 ANKRD27Q96NW4 1050 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 ZNF587Q96SQ5 575 aaPredicted RBP22.92■■□□□ 1.26
NPHP3-202ENST00000383282 SPATA5L1Q9BVQ7 753 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 BPESC1Q9GZL8 116 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 SEC61A2Q9H9S3 476 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 GPR35Q9HC97 309 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 B3GAT1Q9P2W7 334 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 SEC14L4Q9UDX3 406 aa22.92■■□□□ 1.26
NPHP3-202ENST00000383282 YLPM1P49750 1951 aaKnown RBP22.91■■□□□ 1.26
NPHP3-202ENST00000383282 IGHV4-61A0A0C4DH41 118 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 EDF1O60869 148 aaKnown RBP22.91■■□□□ 1.26
NPHP3-202ENST00000383282 FZD7O75084 574 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 ARR3P36575 388 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 CAPZA2P47755 286 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 NCALDP61601 193 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 NPRL3Q12980 569 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 CEACAM16Q2WEN9 425 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 H1FNTQ75WM6 255 aaPredicted RBP22.91■■□□□ 1.26
NPHP3-202ENST00000383282 KRT73Q86Y46 540 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 TAAR8Q969N4 342 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 CRLF2Q9HC73 371 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 SELENONQ9NZV5 590 aa22.91■■□□□ 1.26
NPHP3-202ENST00000383282 TRAV36DV7A0A075B6V5 113 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 A0A1B0GWA3 101 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 hCG_2039718K7EN88 272 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 TGDSO95455 350 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 ZNF23P17027 643 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 NPR2P20594 1047 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 GRPRP30550 384 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 MFSD13AQ14CX5 517 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 ALG10BQ5I7T1 473 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 GCNT6Q5T4J0 391 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 SPATA21Q7Z572 469 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 IL17RDQ8NFM7 739 aa22.9■■□□□ 1.26
NPHP3-202ENST00000383282 NEU4Q8WWR8 484 aaPredicted RBP22.9■■□□□ 1.26
NPHP3-202ENST00000383282 SLC35F4A4IF30 521 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 ZNF99A8MXY4 864 aaPredicted RBP22.89■■□□□ 1.25
NPHP3-202ENST00000383282 POLR3GO15318 223 aaPredicted RBP22.89■■□□□ 1.25
NPHP3-202ENST00000383282 CELA3BP08861 270 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 ARAFP10398 606 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 NQO1P15559 274 aaKnown RBP22.89■■□□□ 1.25
NPHP3-202ENST00000383282 PPIBP23284 216 aaKnown RBP22.89■■□□□ 1.25
NPHP3-202ENST00000383282 THBS4P35443 961 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 HGFACQ04756 655 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 FAM120AOSQ5T036 256 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 ULK3Q6PHR2 472 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 DHRS4L2Q6PKH6 230 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 UEVLDQ8IX04 471 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 ADPRHL1Q8NDY3 354 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 NFKBIDQ8NI38 313 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 RNF217Q8TC41 542 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 OR2M2Q96R28 347 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 EPYCQ99645 322 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 CCDC134Q9H6E4 229 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 DYNLRB1Q9NP97 96 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 USP22Q9UPT9 525 aa22.89■■□□□ 1.25
NPHP3-202ENST00000383282 IGHV2OR16-5A0A0B4J2B6 119 aa22.88■■□□□ 1.25
NPHP3-202ENST00000383282 LOC102725191A0A1B0GVB3 256 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms