RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 MS4A15Q8N5U1 240 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 TEX19Q8NA77 164 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 OR51L1Q8NGJ5 315 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 SMAP2Q8WU79 429 aaPredicted RBP17.42■□□□□ 0.38
GMDS-201ENST00000380805 PELI1Q96FA3 418 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 CTRCQ99895 268 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 CPNE5Q9HCH3 593 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 MYOTQ9UBF9 498 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 GRHPRQ9UBQ7 328 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 B3GALT1Q9Y5Z6 326 aa17.42■□□□□ 0.38
GMDS-201ENST00000380805 B4DXG7 233 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 IGHMP01871 453 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 F13BP05160 661 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ZNF28P17035 718 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 PRKCAP17252 672 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 NAA10P41227 235 aaPredicted RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 INSL4Q14641 139 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 CDK5R1Q15078 307 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ZNF79Q15937 498 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 C1orf140Q5VVS0 124 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 C1QL3Q5VWW1 255 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ARL9Q6T311 187 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 FAM198BQ6UWH4 519 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 SLC22A16Q86VW1 577 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ELP5Q8TE02 316 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 KIAA1143Q96AT1 154 aaPredicted RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 SMIM19Q96E16 107 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 RNF32Q9H0A6 362 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ABCB9Q9NP78 766 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 RPRD1BQ9NQG5 326 aaKnown RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 NCDNQ9UBB6 729 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 COPS3Q9UNS2 423 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 OTOGLQ3ZCN5 2332 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 FTCDNL1E5RQL4 147 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 AGRPO00253 132 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 OR2T1O43869 369 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 SELENOFO60613 162 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 FBXO45P0C2W1 286 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 GTF2E2P29084 291 aaKnown RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 PYCR1P32322 319 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 PPP3R1P63098 170 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 PCOLCEQ15113 449 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 SLC16A9Q7RTY1 509 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 OR2T4Q8NH00 348 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ABHD4Q8TB40 342 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 ATF6BQ99941 703 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 GTPBP2Q9BX10 602 aaKnown RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 SRRQ9GZT4 340 aa17.41■□□□□ 0.38
GMDS-201ENST00000380805 AKIRIN1Q9H9L7 192 aaPredicted RBP17.41■□□□□ 0.38
GMDS-201ENST00000380805 DVL2O14641 736 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 GMFGO60234 142 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 FZD7O75084 574 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 MSX1P28360 303 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 MAP2K6P52564 334 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 GBX2P52951 348 aaPredicted RBP17.4■□□□□ 0.38
GMDS-201ENST00000380805 NHLH1Q02575 133 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 TP53I3Q53FA7 332 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 SLC25A53Q5H9E4 307 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 EEF1A1P5Q5VTE0 462 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 RPL22L1Q6P5R6 122 aaKnown RBP17.4■□□□□ 0.38
GMDS-201ENST00000380805 TPRA1Q86W33 373 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 TIGD4Q8IY51 512 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 OR6K6Q8NGW6 343 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 SLC22A8Q8TCC7 542 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 C8orf44Q96CB5 159 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 MNTQ99583 582 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 MARCH7Q9H992 704 aa17.4■□□□□ 0.38
GMDS-201ENST00000380805 ZNF346Q9UL40 294 aaKnown RBP17.4■□□□□ 0.38
GMDS-201ENST00000380805 C4orf47A7E2U8 309 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 GDF9O60383 454 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 KLK3P07288 261 aaPredicted RBP17.39■□□□□ 0.37
GMDS-201ENST00000380805 CCKBRP32239 447 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 PTGDSP41222 190 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 APOBEC1P41238 236 aaKnown RBP17.39■□□□□ 0.37
GMDS-201ENST00000380805 HCCSP53701 268 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 SPEM2Q0P670 501 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 DNASE1L3Q13609 305 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 NTRK2Q16620 822 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 ZNF554Q86TJ5 538 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 ZNF519Q8TB69 540 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 SETD6Q8TBK2 473 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 HAVCR2Q8TDQ0 301 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 THAP3Q8WTV1 239 aaPredicted RBP17.39■□□□□ 0.37
GMDS-201ENST00000380805 ACOT12Q8WYK0 555 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 MFRPQ9BY79 579 aa17.39■□□□□ 0.37
GMDS-201ENST00000380805 MRPL39Q9NYK5 338 aaKnown RBP17.39■□□□□ 0.37
GMDS-201ENST00000380805 ZFHX2Q9C0A1 2572 aaPredicted RBP17.39■□□□□ 0.37
GMDS-201ENST00000380805 A0A1W2PQ72 361 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 B4E171 279 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 ZNF208O43345 1280 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 AHSA1O95433 338 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 RENP00797 406 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SERPINA3P01011 423 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 UMODP07911 640 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 TSPAN7P41732 249 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SIRPAP78324 504 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SF3A2Q15428 464 aaKnown RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 PAMR1Q6UXH9 720 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms