RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 MED25Q71SY5 747 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 LHFPL3Q86UP9 236 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 CBLN2Q8IUK8 224 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC43A2Q8N370 569 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 TBC1D19Q8N5T2 526 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 OR4Q3Q8NH05 313 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 TFGQ92734 400 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 GAL3ST1Q99999 423 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 PDCD10Q9BUL8 212 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ALX4Q9H161 411 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC38A1Q9H2H9 487 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 NOX3Q9HBY0 568 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ZNF334Q9HCZ1 680 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MYOZ1Q9NP98 299 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 SPG21Q9NZD8 308 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 LRIT1Q9P2V4 623 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MIOXQ9UGB7 285 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 A0A0D9SG52 128 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MBD3L4A6NDZ8 208 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MBD3L3A6NE82 208 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 C5orf58C9J3I9 102 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 FOXE1O00358 373 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ARPC5O15511 151 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 B4GALT3O60512 393 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MOCS2O96007 188 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ALPIP09923 528 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ZNF44P15621 663 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 CFPP27918 469 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 OR1E1P30953 314 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 VIPR1P32241 457 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 PTH2RP49190 550 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MRPS10P82664 201 aaKnown RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 B4GALNT1Q00973 533 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ZNF763Q0D2J5 394 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ARHGEF7Q14155 803 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 CDNFQ49AH0 187 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 PAN3Q58A45 887 aaKnown RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 HAGHLQ6PII5 290 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 UNQ9370/PRO34162Q6UXP9 181 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 Q6ZVL8 140 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 RBM45Q8IUH3 476 aaKnown RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 OR4D9Q8NGE8 314 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 STOML3Q8TAV4 291 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ZCCHC10Q8TBK6 192 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MALSU1Q96EH3 234 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 PRRC1Q96M27 445 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 OR1F2PQ96R84 312 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 PARK7Q99497 189 aaKnown RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 MESP1Q9BRJ9 268 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 ARL6Q9H0F7 186 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 DUSP15Q9H1R2 295 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 WDR13Q9H1Z4 485 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 XKR8Q9H6D3 395 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 C8orf33Q9H7E9 229 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 BPIFA1Q9NP55 256 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC22A11Q9NSA0 550 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 WSB2Q9NYS7 404 aaPredicted RBP6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 LHX3Q9UBR4 397 aa6.12□□□□□ -1.43
CDKAL1-202ENST00000378610 TTC3P53804 2025 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ARHGEF33A8MVX0 844 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 FAM157AC9JC47 383 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 PHYHO14832 338 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ARPC1BO15143 372 aaKnown RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 LCMT2O60294 686 aaKnown RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 B4GALT2O60909 372 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 NME6O75414 186 aaPredicted RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 KDM4BO94953 1096 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ANXA4P09525 319 aaPredicted RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 CSRP1P21291 193 aaKnown RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 DRD5P21918 477 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 PAICSP22234 425 aaKnown RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 DPP4P27487 766 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 WNT5AP41221 380 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 AP3S2P59780 193 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 PPP2CBP62714 309 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 PPP2CAP67775 309 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 DDX39BQ13838 428 aaKnown RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 LINC00303Q3SY05 128 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 LY6G6FQ5SQ64 297 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 PRAMEF18Q5VWM3 479 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 FIGNL1Q6PIW4 674 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC16A13Q7RTY0 426 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ANGPTL5Q86XS5 388 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 YAF2Q8IY57 180 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 OR4K5Q8NGD3 323 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ABHD4Q8TB40 342 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 NR4A3Q92570 626 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 EDAQ92838 391 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC25A38Q96DW6 304 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 KLHDC7BQ96G42 594 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 GFI1Q99684 422 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 RERGLQ9H628 205 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 EGLN3Q9H6Z9 239 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 GPN1Q9HCN4 374 aaPredicted RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 IL26Q9NPH9 171 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 BEX4Q9NWD9 120 aaPredicted RBP6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ARL15Q9NXU5 204 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 DKK4Q9UBT3 224 aa6.11□□□□□ -1.43
CDKAL1-202ENST00000378610 ST6GALNAC2Q9UJ37 374 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms