RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 OPRD1P41143 372 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 UBE2KP61086 200 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 HIST2H3PS2Q5TEC6 136 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 OR52W1Q6IF63 320 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ZFP82Q8N141 532 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM255BQ8WV15 326 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 RNF167Q9H6Y7 350 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 KLK4Q9Y5K2 254 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 LILRB5O75023 590 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 MSR1P21757 451 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 GNB1P62873 340 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 OR8B8Q15620 311 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 LTB4RQ15722 352 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM240Q5SV17 173 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM244Q5VVB8 128 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 RNF128Q8TEB7 428 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 NUDT8Q8WV74 236 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 NRIP3Q9NQ35 241 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC6A14Q9UN76 642 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 PUS1Q9Y606 427 aaKnown RBP eCLIP11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 SERPINE2P07093 398 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC14A1Q13336 389 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 OR6V1Q8N148 313 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 OR4Q3Q8NH05 313 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ABHD4Q8TB40 342 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 ZFAND1Q8TCF1 268 aa11.12□□□□□ -0.63
PCDHA9-201ENST00000378122 LOXHD1Q8IVV2 1947 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM269A0A1B0GVZ9 245 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM221A6NGB7 291 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 M0R296 226 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 IDUAP35475 653 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MTNR1BP49286 362 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SEC61A1P61619 476 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 IDO2Q6ZQW0 420 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 RFLNAQ6ZTI6 216 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 KHSRPQ92945 711 aaKnown RBP eCLIP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 UBE2FQ969M7 185 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TBC1D20Q96BZ9 403 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ZBED3Q96IU2 234 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 HRASLS5Q96KN8 279 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 LMF2Q9BU23 707 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SAMD10Q9BYL1 202 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC25A31Q9H0C2 315 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ADAMTS5Q9UNA0 930 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 I6L893 689 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 FOXE1O00358 373 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ZNF593O00488 134 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TOR1AO14656 332 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 IGFBP1P08833 259 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ERVK-16P61578 105 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MRPS21P82921 87 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MBOAT2Q6ZWT7 520 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 VRK3Q8IV63 474 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 UBALD2Q8IYN6 164 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 OR4K15Q8NH41 348 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PCDHGA1Q9Y5H4 931 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 F3P13726 295 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 CSNK1DP48730 415 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PPT1P50897 306 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 CLDN22Q8N7P3 220 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 FRMD1Q8N878 549 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ADOQ96SZ5 270 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 GCM1Q9NP62 436 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PTTG3PQ9NZH4 202 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TAAR2Q9P1P5 351 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SLC22A23A1A5C7 686 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 FAM166BA8MTA8 275 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SULT2B1O00204 365 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 LILRB3O75022 631 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 SIX6O95475 246 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MAT1AQ00266 395 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TAGLNQ01995 201 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 ZP2Q05996 745 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 KIR2DS3Q14952 304 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 YIF1BQ5BJH7 314 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TRILQ7L0X0 811 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MFSD9Q8NBP5 474 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 CSNK1A1P48729 337 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 MCATQ8IVS2 390 aaKnown RBP11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 OR5M1Q8NGP8 315 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 PSD2Q9BQI7 771 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 TMEM100Q9NV29 134 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 HHLA2Q9UM44 414 aa11.11□□□□□ -0.63
PCDHA9-201ENST00000378122 HHLA1C9JL84 531 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 FURINP09958 794 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 MYF5P13349 255 aa11.1□□□□□ -0.63
PCDHA9-201ENST00000378122 ETV1P50549 477 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms