RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 GABRG1Q8N1C3 465 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 KDM8Q8N371 416 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 LRRC17Q8N6Y2 441 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 POMGNT2Q8NAT1 580 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 ZNF385AQ96PM9 386 aaKnown RBP11.72□□□□□ -0.53
CKAP2-202ENST00000378034 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FUZQ9BT04 418 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 TAS2R5Q9NYW4 299 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 GPR52Q9Y2T5 361 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 TCRBV3S1A0A5B6 114 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 DHRS12A0PJE2 317 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 C16orf97H3BN30 126 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 PIP5K1CO60331 668 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 HPRP00739 348 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 PSMB1P20618 241 aaKnown RBP11.72□□□□□ -0.53
CKAP2-202ENST00000378034 AHCYP23526 432 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 RRM2P31350 389 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 UGT2B10P36537 528 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 HMGA2P52926 109 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 FAM27E3Q08E93 113 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 GK3PQ14409 553 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 EXOC3L2Q2M3D2 409 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 TBPL2Q6SJ96 375 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 SPATA24Q86W54 205 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 LINC00471Q8N535 108 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 YY1AP1Q9H869 796 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 MALT1Q9UDY8 824 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 TMCC3Q9ULS5 477 aa11.72□□□□□ -0.53
CKAP2-202ENST00000378034 SH3PXD2BA1X283 911 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 HNRNPRO43390 633 aaKnown RBP11.71□□□□□ -0.53
CKAP2-202ENST00000378034 TRAF3IP2O43734 574 aaPredicted RBP11.71□□□□□ -0.53
CKAP2-202ENST00000378034 PPP3CBP16298 524 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 COL8A1P27658 744 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 CLDN17P56750 224 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 POU3F1Q03052 451 aaPredicted RBP11.71□□□□□ -0.53
CKAP2-202ENST00000378034 NHLRC1Q6VVB1 395 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 ABHD12BQ7Z5M8 362 aaPredicted RBP11.71□□□□□ -0.53
CKAP2-202ENST00000378034 OR52J3Q8NH60 311 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 CANT1Q8WVQ1 401 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 ALPK1Q96QP1 1244 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 CHID1Q9BWS9 393 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 SLCO5A1Q9H2Y9 848 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 KCNN3Q9UGI6 736 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 PRSS50Q9UI38 385 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 HIF3AQ9Y2N7 669 aa11.71□□□□□ -0.53
CKAP2-202ENST00000378034 TRBV4-1A0A0J9YWV2 114 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 TUBAL3A6NHL2 446 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 EFCAB9A8MZ26 197 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 RNF13O43567 381 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 CIB2O75838 187 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF432O94892 652 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 ADAP00813 363 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 SAGP10523 405 aaPredicted RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 MAKP20794 623 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 IFNGR2P38484 337 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 KIR2DL3P43628 341 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 ITGADQ13349 1161 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 SFRP5Q5T4F7 317 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 OR2T5Q6IEZ7 315 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 NIPAL3Q6P499 406 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 STAC2Q6ZMT1 411 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 STEAP2Q8NFT2 490 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 OR4K5Q8NGD3 323 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 OR2T29Q8NH02 315 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 FAM222BQ8WU58 562 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 ADAD1Q96M93 576 aaKnown RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 LINC00470Q9BZP3 86 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 UPB1Q9UBR1 384 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 AURKCQ9UQB9 309 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 C11orf98E9PRG8 122 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 SLC43A1O75387 559 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 COX5AP20674 150 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 EDNRAP25101 427 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 LIMS1P48059 325 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 LSM11P83369 360 aaKnown RBP eCLIP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 RPL18Q07020 188 aaKnown RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 SEC23BQ15437 767 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 C1orf146Q5VVC0 180 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 OAFQ86UD1 273 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 CXorf67Q86X51 503 aaPredicted RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 PAPD5Q8NDF8 572 aaKnown RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 NDEL1Q9GZM8 345 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 CCM2LQ9NUG4 571 aaPredicted RBP11.7□□□□□ -0.54
CKAP2-202ENST00000378034 LYVE1Q9Y5Y7 322 aa11.7□□□□□ -0.54
CKAP2-202ENST00000378034 NPIPB13A6NJU9 1138 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 NPIPB4C9JG80 1138 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 TNFRSF11BO00300 401 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 HLA-DOBP13765 273 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 OMPP47874 163 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 SELENOPP49908 381 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 PRPS1P60891 318 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 TAF11Q15544 211 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms