RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 B3GAT1Q9P2W7 334 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 MGAT4BQ9UQ53 548 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 MAGED1Q9Y5V3 778 aaPredicted RBP10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 ATP23Q9Y6H3 246 aa10.15□□□□□ -0.78
SMARCE1-203ENST00000377808 MED13LQ71F56 2210 aa10.15□□□□□ -0.79
SMARCE1-203ENST00000377808 ELOVL7A1L3X0 281 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 SHISA9B4DS77 424 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 M0R3G1 203 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 GSTA4O15217 222 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CH25HO95992 272 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 SOD3P08294 240 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 ADORA3P0DMS8 318 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 HLA-DOBP13765 273 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CD40P25942 277 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CDKN1AP38936 164 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CAPZA2P47755 286 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 OR1E2P47887 323 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 NUDT2P50583 147 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CRYBA2P53672 197 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 TUBA1BP68363 451 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 TUBA4AP68366 448 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 LTBQ06643 244 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 PUDPQ08623 228 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 VEZF1Q14119 521 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 TBRG1Q3YBR2 411 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CYBRD1Q53TN4 286 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 WDR88Q6ZMY6 472 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 TUBA1AQ71U36 451 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 CPLX4Q7Z7G2 160 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 MICU2Q8IYU8 434 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 SCAIQ8N9R8 606 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 WDR31Q8NA23 367 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 ADPRHL1Q8NDY3 354 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 OR1K1Q8NGR3 316 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 TEP1Q99973 2627 aaKnown RBP10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 KCNS3Q9BQ31 491 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 EMC6Q9BV81 110 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 AMBRA1Q9C0C7 1298 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 FAIMQ9NVQ4 179 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 MED29Q9NX70 200 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 RCE1Q9Y256 329 aa10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 RAI1Q7Z5J4 1906 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF726A6NNF4 738 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 MS4A18H0YCH9 400 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 RNF13O43567 381 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 TRAF3IP2O43734 574 aaPredicted RBP10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 SEC14L2O76054 403 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 HPRP00739 348 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 THY1P04216 161 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 HIST1H2ABP04908 130 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 SLC7A2P52569 658 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 GNGT1P63211 74 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 LIPEQ05469 1076 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 CAMK2DQ13557 499 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 CEACAM16Q2WEN9 425 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 MS4A18Q3C1V0 323 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 HIST3H2AQ7L7L0 130 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 LINGO2Q7L985 606 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 TREML1Q86YW5 311 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 KRTAP1-3Q8IUG1 177 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 PIK3C3Q8NEB9 887 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 OR6N1Q8NGY5 312 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 OR5J2Q8NH18 312 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 OR6S1Q8NH40 331 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 HIST1H2ACQ93077 130 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 TRMT61AQ96FX7 289 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 OR2M2Q96R28 347 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 GSX2Q9BZM3 304 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 LINC00470Q9BZP3 86 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 EFCAB1Q9HAE3 211 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 CRLF2Q9HC73 371 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 GPR35Q9HC97 309 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 NANSQ9NR45 359 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 CMTM6Q9NX76 183 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 MRPL39Q9NYK5 338 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 GMPR2Q9P2T1 348 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 AP3M1Q9Y2T2 418 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 NOX1Q9Y5S8 564 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 HIVEP1P15822 2718 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 ROS1P08922 2347 aa10.13□□□□□ -0.79
SMARCE1-203ENST00000377808 TRIM64A6NGJ6 449 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 TRIM64BA6NI03 449 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 PLPP3O14495 311 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF432O94892 652 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF682O95780 498 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 MT-ATP6P00846 226 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 LSP1P33241 339 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 KDELR2P33947 212 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 FABP6P51161 128 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 GYS2P54840 703 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 ARF1P84077 181 aaKnown RBP10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 PIN1Q13526 163 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 ZNF74Q16587 644 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 PGGHGQ32M88 737 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 NANOGNBQ7Z5D8 188 aa10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 TSPYL5Q86VY4 417 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-203ENST00000377808 FBXL14Q8N1E6 418 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms