RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 AKR7A3O95154 331 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PTTG1O95997 202 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 RELAQ04206 551 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 TMPPEQ6ZT21 453 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 WDR76Q9H967 626 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 PCDHB16Q9NRJ7 776 aa13.28□□□□□ -0.28
TCOF1-202ENST00000377797 ZFC3H1O60293 1989 aaKnown RBP13.28□□□□□ -0.28
TCOF1-202ENST00000377797 CD46P15529 392 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 APOBEC1P41238 236 aaKnown RBP13.27□□□□□ -0.28
TCOF1-202ENST00000377797 CBX5P45973 191 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 GZMMP51124 257 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 FGFBP1Q14512 234 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 FAM199XQ6PEV8 388 aaPredicted RBP13.27□□□□□ -0.28
TCOF1-202ENST00000377797 ABHD12BQ7Z5M8 362 aaPredicted RBP13.27□□□□□ -0.28
TCOF1-202ENST00000377797 TMEM99Q8N816 258 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 ABHD4Q8TB40 342 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 CDC6Q99741 560 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 SLC19A3Q9BZV2 496 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 FANCFQ9NPI8 374 aa13.27□□□□□ -0.28
TCOF1-202ENST00000377797 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
TCOF1-202ENST00000377797 BMP4P12644 408 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 DRD5P21918 477 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
TCOF1-202ENST00000377797 ZNF584Q8IVC4 421 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 NPRL2Q8WTW4 380 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 FER1L6-AS2Q96M78 137 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 EDEM2Q9BV94 578 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 DUSP15Q9H1R2 295 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-202ENST00000377797 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
TCOF1-202ENST00000377797 GPR85P60893 370 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 MAB21L1Q13394 359 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 NIPAL3Q6P499 406 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 RNF167Q9H6Y7 350 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 GRIP1Q9Y3R0 1128 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 NYNRINQ9P2P1 1898 aaKnown RBP13.27□□□□□ -0.29
TCOF1-202ENST00000377797 A0A1B0GVG6 124 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 CLEC2LP0C7M8 214 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 MEP1BQ16820 701 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 TPRA1Q86W33 373 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 ZNF681Q96N22 645 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 EMC6Q9BV81 110 aa13.27□□□□□ -0.29
TCOF1-202ENST00000377797 CYR61O00622 381 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SURF4O15260 269 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 STOMP27105 288 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 RPL18Q07020 188 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SLC35D3Q5M8T2 416 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SYNPO2LQ9H987 977 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 MOV10Q9HCE1 1003 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM9BQ9NQ34 198 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 ASXL3Q9C0F0 2248 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 RIF1Q5UIP0 2472 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 UGT2B10P36537 528 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 RPL27P61353 136 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 DUSP2Q05923 314 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SIGLEC14Q08ET2 396 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TBRG1Q3YBR2 411 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 C3orf33Q6P1S2 294 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 LINC00346Q8IVM7 164 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 OR8H1Q8NGG4 311 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 ANKRD9Q96BM1 317 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 C1orf198Q9H425 327 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 IL20Q9NYY1 176 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 DOCK4Q8N1I0 1966 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 GATBO75879 557 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 IFNGR1P15260 489 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 ACKR1Q16570 336 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TSSK2Q96PF2 358 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 PIGQQ9BRB3 760 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 EIF3KQ9UBQ5 218 aaKnown RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 ABCD3P28288 659 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 STARP49675 285 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 AKR1D1P51857 326 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 AKIRIN2Q53H80 203 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SFRP4Q6FHJ7 346 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 LAX1Q8IWV1 398 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 SLC25A43Q8WUT9 341 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 FKRPQ9H9S5 495 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 CPNE5Q9HCH3 593 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 MEPEQ9NQ76 525 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-202ENST00000377797 OSGIN1Q9UJX0 560 aa13.26□□□□□ -0.29
TCOF1-202ENST00000377797 TRDV1A0A1B0GX56 115 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 C5orf51A6NDU8 294 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 UBE2NP61088 152 aaKnown RBP13.25□□□□□ -0.29
TCOF1-202ENST00000377797 MALLQ13021 153 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 PRTGQ2VWP7 1150 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 FAM46BQ96A09 425 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 MNTQ99583 582 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 TTYH1Q9H313 450 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-202ENST00000377797 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
TCOF1-202ENST00000377797 A0A1B0GTQ1 180 aa13.25□□□□□ -0.29
TCOF1-202ENST00000377797 A0A1W2PQ09 198 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms