RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SLC35G3Q8N808 338 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 TGIF2Q9GZN2 237 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 WWTR1Q9GZV5 400 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SLC31A2O15432 143 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 FRS3O43559 492 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 GMPRP36959 345 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 RAB13P51153 203 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 DCAF7P61962 342 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SLC35A1P78382 337 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 DEFB133Q30KQ1 61 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 MANEAQ5SRI9 462 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SEMA4GQ9NTN9 838 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 FZD7O75084 574 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 CORO2AQ92828 525 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 BADQ92934 168 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SLCO3A1Q9UIG8 710 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 GALR3O60755 368 aaPredicted RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 BEX5Q5H9J7 111 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 C12orf76Q8N812 135 aaPredicted RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 MOCOSQ96EN8 888 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ARPC5LQ9BPX5 153 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.557e-7■■■■■ 33.2
VPS13A-204ENST00000376634 NFS1Q9Y697 457 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 RGS11O94810 467 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ADH4P08319 380 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 DPP4P27487 766 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 DHRS9Q9BPW9 319 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SELENOIQ9C0D9 397 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 POFUT1Q9H488 388 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 CNOT2Q9NZN8 540 aaKnown RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ARSDP51689 593 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 KATNB1Q9BVA0 655 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ACPTQ9BZG2 426 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SOCS6O14544 535 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ACP2P11117 423 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 TGM4P49221 684 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SNTB1Q13884 538 aaKnown RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF691Q5VV52 312 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 TOE1Q96GM8 510 aaKnown RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 DDX31Q9H8H2 851 aaKnown RBP11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SPINT2O43291 252 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 LAP3P28838 519 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CSN1S1P47710 185 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 WDR5P61964 334 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 GRB2P62993 217 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF266Q14584 549 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 GLYR1Q49A26 553 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 COX15Q7KZN9 410 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ETV7Q9Y603 341 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 EDN3P14138 238 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM31Q5JXX7 168 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CATSPERDQ86XM0 798 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 FCRL1Q96LA6 429 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 SUCNR1Q9BXA5 334 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TPSD1Q9BZJ3 242 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 SLC2A8Q9NY64 477 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 PGAP2Q9UHJ9 254 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 EXO1Q9UQ84 846 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CDC14CA4D256 554 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 OR7E24Q6IFN5 339 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CBR1P16152 277 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM176BQ3YBM2 270 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM184AQ6ZMB5 413 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CLSTN3Q9BQT9 956 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 WDR83Q9BRX9 315 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 SCN4AP35499 1836 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CTRB1P17538 263 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TAGLN2P37802 199 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 FAM189BP81408 668 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TCEAL1Q15170 157 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CPZQ66K79 652 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CTRB2Q6GPI1 263 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 RPL22L1Q6P5R6 122 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 DPPA4Q7L190 304 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 REEP6Q96HR9 211 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 RANGRFQ9HD47 186 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 FCGR2AP12318 317 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 TRIM23P36406 574 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 VEZF1Q14119 521 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 SEMA6DQ8NFY4 1073 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ADAMTS14Q8WXS8 1223 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 NT5DC2Q9H857 520 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 WNT11O96014 354 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CHST14Q8NCH0 376 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ZCCHC4Q9H5U6 513 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 EPHX3Q9H6B9 360 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 CLDN2P57739 230 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 HTRA4P83105 476 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 OVCH1Q7RTY7 1134 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF300Q96RE9 604 aaPredicted RBP11.61□□□□□ -0.55
VPS13A-204ENST00000376634 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
VPS13A-204ENST00000376634 THADAQ6YHU6 1953 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms