RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 MT-ND5P03915 603 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 HPGDP15428 266 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ZNF19P17023 458 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 PPICP45877 212 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 KRT74Q7RTS7 529 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SLC43A2Q8N370 569 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 OR51J1Q9H342 316 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 EMC7Q9NPA0 242 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 TRIM36Q9NQ86 728 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 UBQLN4Q9NRR5 601 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 HAO2Q9NYQ3 351 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 MMACHCQ9Y4U1 282 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 A0A1W2PRG6 482 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 C7orf66A4D0T2 115 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 RGS9O75916 674 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 DNASE1P24855 282 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 HCCSP53701 268 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 B2MP61769 119 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 GXYLT1Q4G148 440 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 RNASE12Q5GAN4 147 aaKnown RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 BICRALQ6AI39 1079 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 PTCRAQ6ISU1 281 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 APOOLQ6UXV4 268 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SLC25A45Q8N413 288 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SPEM1Q8N4L4 309 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 PHOSPHO1Q8TCT1 267 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SHDQ96IW2 340 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 THAP7Q9BT49 309 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 NDC1Q9BTX1 674 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 PRO3102Q9H379 93 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 WNT16Q9UBV4 365 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ZMIZ1Q9ULJ6 1067 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ADAM18Q9Y3Q7 739 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 FKBP7Q9Y680 259 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 G3V3Q6 166 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 IL33O95760 270 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 FOLR1P15328 257 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 POU3F2P20265 443 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 GALP22466 123 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 OR12D2P58182 307 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 E2F1Q01094 437 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 NTRK2Q16620 822 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 CLVS2Q5SYC1 327 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 FNDC7Q5VTL7 733 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ARL9Q6T311 187 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 METAP1DQ6UB28 335 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 CBLN3Q6UW01 205 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SLC35F3Q8IY50 421 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ZNF440Q8IYI8 595 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 OR51L1Q8NGJ5 315 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 ZMYND19Q96E35 227 aaPredicted RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 C4orf36Q96KX1 117 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
MSH5-202ENST00000375740 MRPL39Q9NYK5 338 aaKnown RBP12.75□□□□□ -0.37
MSH5-202ENST00000375740 TEX13CA0A0J9YWL9 993 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 EEF1E1O43324 174 aaKnown RBP12.74□□□□□ -0.37
MSH5-202ENST00000375740 NUDT21O43809 227 aaKnown RBP12.74□□□□□ -0.37
MSH5-202ENST00000375740 UTS2O95399 124 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 RORAP35398 523 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 ADH7P40394 386 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 EFNA3P52797 238 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 RAB14P61106 215 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 HSF2Q03933 536 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 ST3GAL2Q16842 350 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 LRFN4Q6PJG9 635 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 SSX6Q7RTT6 188 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 PLXDC1Q8IUK5 500 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 PRR22Q8IZ63 422 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
MSH5-202ENST00000375740 ZNF527Q8NB42 609 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 HLA-CQ95604 372 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 CXorf58Q96LI9 332 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 OR1F2PQ96R84 312 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 SDHAF2Q9NX18 166 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 IGKV1D-42A0A075B6H8 117 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 IGKV3D-11A0A0A0MRZ8 115 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 hCG_1807616A0A1W2PRN6 198 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 POM121CA8CG34 1229 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 SCDO00767 359 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 GPR171O14626 319 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 BCAT2O15382 392 aaPredicted RBP12.74□□□□□ -0.37
MSH5-202ENST00000375740 DDAH2O95865 285 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 DHFRP00374 187 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 CCR4P51679 360 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 SLC3A1Q07837 685 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 WBP2NLQ6ICG8 309 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 DPY19L2P2Q6ZN68 376 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 GPR135Q8IZ08 494 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 ZNF721Q8TF20 911 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 DNASE2BQ8WZ79 361 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 LCORQ96JN0 433 aaPredicted RBP12.74□□□□□ -0.37
MSH5-202ENST00000375740 IFT46Q9NQC8 304 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 DLL4Q9NR61 685 aa12.74□□□□□ -0.37
MSH5-202ENST00000375740 ZNF337Q9Y3M9 751 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms