RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 PHYHD1Q5SRE7 291 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 SWT1Q5T5J6 900 aaKnown RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 OR7E24Q6IFN5 339 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 NHLRC1Q6VVB1 395 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 H1FNTQ75WM6 255 aaPredicted RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 YTHDF3Q7Z739 585 aaKnown RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 ADPRHL1Q8NDY3 354 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 TMEM171Q8WVE6 324 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 ZNF837Q96EG3 531 aaPredicted RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 Q96MF0 132 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 PRSS27Q9BQR3 290 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 TMEM43Q9BTV4 400 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 MRGBPQ9NV56 204 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 ZNF701Q9NV72 531 aaPredicted RBP13.64□□□□□ -0.23
SDHB-201ENST00000375499 SELENONQ9NZV5 590 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 SLC7A7Q9UM01 511 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 B3GALT5Q9Y2C3 310 aa13.64□□□□□ -0.23
SDHB-201ENST00000375499 ATRQ13535 2644 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TRIM64A6NGJ6 449 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TRIM64BA6NI03 449 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 ZNF587BE7ETH6 402 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 OVOL3O00110 214 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 NPPAP01160 153 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 CD8AP01732 235 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 COX4I1P13073 169 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 PAX1P15863 534 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 FUT4P22083 530 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 PCSK6P29122 969 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 CDKN1AP38936 164 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TUBA1BP68363 451 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TUBA4AP68366 448 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TBRG1Q3YBR2 411 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TUBA1AQ71U36 451 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 CARM1Q86X55 608 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 TMEM123Q8N131 208 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 C17orf78Q8N4C9 275 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 OR6S1Q8NH40 331 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 SLC26A7Q8TE54 656 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 SMAP2Q8WU79 429 aaPredicted RBP13.63□□□□□ -0.23
SDHB-201ENST00000375499 TXNDC15Q96J42 360 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 OR2M2Q96R28 347 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 EPYCQ99645 322 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 SH3GL1Q99961 368 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 ZNF426Q9BUY5 554 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 EMC6Q9BV81 110 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 LINC00470Q9BZP3 86 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 EVA1AQ9H8M9 152 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 MED29Q9NX70 200 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 RCE1Q9Y256 329 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 ZANQ9Y493 2812 aa13.63□□□□□ -0.23
SDHB-201ENST00000375499 A0A096LPE4 126 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 LOC102725191A0A1B0GVB3 256 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 A0A1W2PPZ6 126 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 TRAPPC13A5PLN9 417 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 E7EQL1 145 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 H7C1Q1 480 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 KPNA4O00629 521 aaPredicted RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 SLC22A2O15244 555 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 ATP8B1O43520 1251 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 KRT33AO76009 404 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 NQO1P15559 274 aaKnown RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 OR1E2P47887 323 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 RPS4XP62701 263 aaKnown RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 ROR2Q01974 943 aaKnown RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 POU3F1Q03052 451 aaPredicted RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 TGFBR3Q03167 851 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 VEZF1Q14119 521 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 LRRC23Q53EV4 343 aaPredicted RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 PCYOX1LQ8NBM8 494 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 BCL2L2Q92843 193 aaPredicted RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 BOD1Q96IK1 185 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 TRAF4Q9BUZ4 470 aaPredicted RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 CXorf56Q9H5V9 222 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 GID8Q9NWU2 228 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 MRPL39Q9NYK5 338 aaKnown RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 CISD1Q9NZ45 108 aaKnown RBP13.62□□□□□ -0.23
SDHB-201ENST00000375499 AMDHD2Q9Y303 409 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 SH3GLB1Q9Y371 365 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 CORINQ9Y5Q5 1042 aa13.62□□□□□ -0.23
SDHB-201ENST00000375499 ZNF503-AS2A6NEH8 195 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 NME4O00746 187 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 PLPP3O14495 311 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 NDUFS7O75251 213 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 SERPINI2O75830 405 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 SEC14L2O76054 403 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 PTAFRP25105 342 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 GYS2P54840 703 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 ATP5J2P56134 94 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 PUDPQ08623 228 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 PMS2P3Q13401 168 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 C1DQ13901 141 aaKnown RBP13.61□□□□□ -0.23
SDHB-201ENST00000375499 ZNF74Q16587 644 aa13.61□□□□□ -0.23
SDHB-201ENST00000375499 CARD17Q5XLA6 110 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms