RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TRAPPC4Q9Y296 219 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ZNF337Q9Y3M9 751 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PRUNE2Q8WUY3 3088 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 CCDC163A0A0D9SF12 145 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 A0A1B0GX78 115 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 KRBOX1C9JBD0 128 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 FUT1P19526 365 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ZP3P21754 424 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SLC6A8P48029 635 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PRPS1P60891 318 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 RPS25P62851 125 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 ERVK-25P63136 954 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 NNATQ16517 81 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ISXQ2M1V0 245 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ZNF782Q6ZMW2 699 aaPredicted RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 C17orf107Q6ZR85 190 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 GDPD1Q8N9F7 314 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 MRPL48Q96GC5 212 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 ELF4Q99607 663 aaPredicted RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 DPYSL5Q9BPU6 564 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ALG8Q9BVK2 526 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SLC22A4Q9H015 551 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TRIM36Q9NQ86 728 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 BABAM2Q9NXR7 383 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ASH2LQ9UBL3 628 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 COPS7AQ9UBW8 275 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SRPK3Q9UPE1 567 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 CMAHPQ9Y471 501 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TCRBV16S1A1N1A0A5B0 115 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR2W5A6NFC9 320 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ELOA3DA6NLF2 546 aaPredicted RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR6C76A6NM76 312 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 RFPL3O75679 317 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PPP1R3DO95685 299 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 MT-ND5P03915 603 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 RPP30P78346 268 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 ELOA3BQ3SY89 546 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ARHGAP40Q5TG30 622 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TIGD3Q6B0B8 471 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TEX261Q6UWH6 196 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 DPY19L2P2Q6ZN68 376 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 SIRT6Q8N6T7 355 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ELOA3Q8NG57 546 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PHOSPHO1Q8TCT1 267 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PCNPQ8WW12 178 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 TMEM203Q969S6 136 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TRMT61AQ96FX7 289 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 ERMAPQ96PL5 475 aaPredicted RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 ZNF649Q9BS31 505 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 TMEM43Q9BTV4 400 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PAPOLGQ9BWT3 736 aaKnown RBP7.51□□□□□ -1.21
UBR4-202ENST00000375224 OR8D2Q9GZM6 311 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 ENKD1Q9H0I2 346 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 WNT5BQ9H1J7 359 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 COA4Q9NYJ1 87 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PCDHGB7Q9Y5F8 929 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 U3KQ87 197 aa7.51□□□□□ -1.21
UBR4-202ENST00000375224 PCDH15Q96QU1 1955 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TRBV23-1A0A0A0MS06 115 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 C2orf92A0A1B0GVN3 265 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF264O43296 627 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SSX4O60224 188 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 EIF1BO60739 113 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 IGKV3-11P04433 115 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 EDN3P14138 238 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FOSL2P15408 326 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 CELP19835 753 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 HOXA6P31267 233 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TNFSF8P32971 234 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 EIF1P41567 113 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 SLC16A1P53985 500 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 PLET1Q6UQ28 207 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 C3orf49Q96BT1 292 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NEDD4LQ96PU5 975 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 DCLRE1CQ96SD1 692 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 ACTR6Q9GZN1 396 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 OR51V1Q9H2C8 321 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF768Q9H5H4 540 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 CTSFQ9UBX1 484 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SUSD2Q9UGT4 822 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NUP210LQ5VU65 1888 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 PQLC2LA1A4F0 135 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 UTS2O95399 124 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SBK2P0C263 348 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 G0S2P27469 103 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 IL12BP29460 328 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 GRK6P43250 576 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 PER3P56645 1201 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 CSTF1Q05048 431 aaKnown RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 RIPPLY1Q0D2K3 151 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 ZNF791Q3KP31 576 aaPredicted RBP7.5□□□□□ -1.21
UBR4-202ENST00000375224 DDI2Q5TDH0 399 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 FNDC7Q5VTL7 733 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 LYSMD4Q5XG99 296 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 TMEM71Q6P5X7 295 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 SLC29A4Q7RTT9 530 aa7.5□□□□□ -1.21
UBR4-202ENST00000375224 NUP54Q7Z3B4 507 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms