RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CDX4O14627 284 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FZD7O75084 574 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RENP00797 406 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF19P17023 458 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CALRP27797 417 aaKnown RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GRPRP30550 384 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NAA10P41227 235 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 IFITM3Q01628 133 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MFSD13AQ14CX5 517 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 BICRALQ6AI39 1079 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DMKNQ6E0U4 476 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DCDC5Q6ZRR9 648 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 EGFL6Q8IUX8 553 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NAXDQ8IW45 347 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RFLNBQ8N5W9 214 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR6K6Q8NGW6 343 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR2T4Q8NH00 348 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SMAP2Q8WU79 429 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 HDHD5Q9BXW7 423 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 QPCTLQ9NXS2 382 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PLEKHB1Q9UF11 243 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ST6GALNAC2Q9UJ37 374 aa16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF346Q9UL40 294 aaKnown RBP16.27■□□□□ 0.19
HLA-DQB1-201ENST00000374943 C2orf72A6NCS6 295 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 C4orf47A7E2U8 309 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PLPP3O14495 311 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CTDSP2O14595 271 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SELENOFO60613 162 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 STK17BO94768 372 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CD1AP06126 327 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CLEC2LP0C7M8 214 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 F8A1P23610 371 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 E2F1Q01094 437 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MXD1Q05195 221 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TCF15Q12870 199 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 HNRNPA0Q13151 305 aaKnown RBP16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SNTA1Q13424 505 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SPANXN2Q5MJ10 180 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SLC16A9Q7RTY1 509 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GHDCQ8N2G8 530 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PARP16Q8N5Y8 322 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR11G2Q8NGC1 345 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MFSD8Q8NHS3 518 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF519Q8TB69 540 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SLC25A36Q96CQ1 311 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 LIN37Q96GY3 246 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MRGPRX4Q96LA9 322 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DDA1Q9BW61 102 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR11A1Q9GZK7 315 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TXNIPQ9H3M7 391 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RERGLQ9H628 205 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 HRH3Q9Y5N1 445 aa16.26■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TP53I11O14683 189 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OGG1O15527 345 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ITGA10O75578 1167 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SERPINI2O75830 405 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 UPK1BO75841 260 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DLGAP3O95886 979 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PYCR1P32322 319 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CASP3P42574 277 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF41P51814 821 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RPL27P61353 136 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZP4Q12836 540 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FOXF1Q12946 379 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF181Q2M3W8 571 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PLPPR5Q32ZL2 321 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 EEF1A1P5Q5VTE0 462 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CDCP2Q5VXM1 449 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ARL9Q6T311 187 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ARSKQ6UWY0 536 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DND1Q8IYX4 353 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ARMC10Q8N2F6 343 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CENPSQ8N2Z9 138 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SCAIQ8N9R8 606 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MINDY2Q8NBR6 621 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NEIL3Q8TAT5 605 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 AP3S1Q92572 193 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DDIT4LQ96D03 193 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PGLYRP3Q96LB9 341 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FRMD6Q96NE9 622 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TAAR9Q96RI9 348 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PRRX2Q99811 253 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MROQ9BYG7 248 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TPK1Q9H3S4 243 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NCDNQ9UBB6 729 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 COPS3Q9UNS2 423 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 UGT2A1Q9Y4X1 527 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CHCHD2Q9Y6H1 151 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 R4GN57 208 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GPR179Q6PRD1 2367 aa16.25■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ISPDA4D126 451 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CD8B2A6NJW9 211 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 LOC110117498-PIK3R3F6TDL0 507 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TRIM3O75382 744 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SC5DO75845 299 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RAB40ALP0C0E4 278 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CD8BP10966 210 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GBX2P52951 348 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms