RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ZNF775Q96BV0 537 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 RAB40CQ96S21 281 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TMEM231Q9H6L2 316 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SPHK2Q9NRA0 654 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SIDT1Q9NXL6 827 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 OR6C3Q9NZP0 311 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ZFP30Q9Y2G7 519 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 AMDHD2Q9Y303 409 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 OAS3Q9Y6K5 1087 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 EVPLQ92817 2033 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ANHXE9PGG2 379 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 BCAT2O15382 392 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 EMC8O43402 210 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SIX3O95343 332 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 CER1O95813 267 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 GLP2RO95838 553 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TSPAN13O95857 204 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ALDOCP09972 364 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 SCGB1A1P11684 91 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CD72P21854 359 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RPS3P23396 243 aaKnown RBP eCLIP7.25□□□□□ -1.25
USP48-203ENST00000374732 PTPN7P35236 360 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 APLNRP35414 380 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 OR4D2P58180 307 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 KEAP1Q14145 624 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PGGHGQ32M88 737 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ELFN2Q5R3F8 820 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ZNF585AQ6P3V2 769 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ACOT7LQ6ZUV0 252 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 GLT6D1Q7Z4J2 308 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 MYLIPQ8WY64 445 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RERGQ96A58 199 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 SORCS2Q96PQ0 1159 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 C20orf24Q9BUV8 137 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 FN3KQ9H479 309 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TPT1P8Q9HAU6 139 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 OLAHQ9NV23 265 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TAS2R13Q9NYV9 303 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 MGAMO43451 1857 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 MBLAC1A4D2B0 266 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 K7ERI5 159 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 AQP7O14520 342 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 LAMTOR5O43504 91 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 PDE6DO43924 150 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 EDF1O60869 148 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 RGS11O94810 467 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SLC25A27O95847 323 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CST1P01037 141 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TTPAP49638 278 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ART1P52961 327 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 DEFA1P59665 94 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 DEFA3P59666 94 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 CD81P60033 236 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TSNQ15631 228 aaKnown RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 SRSF7Q16629 238 aaKnown RBP eCLIP7.25□□□□□ -1.253e-8■□□□□ 10.9
USP48-203ENST00000374732 TIGD5Q53EQ6 642 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 RNF111Q6ZNA4 994 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 LINC00299Q6ZSB3 139 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 TMPPEQ6ZT21 453 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SDR9C7Q8NEX9 313 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 OR2M7Q8NG81 312 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ZNF582Q96NG8 517 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 ST6GALNAC5Q9BVH7 336 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 COL25A1Q9BXS0 654 aaPredicted RBP7.25□□□□□ -1.25
USP48-203ENST00000374732 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 G6PC2Q9NQR9 355 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 SMPD4Q9NXE4 827 aa7.25□□□□□ -1.25
USP48-203ENST00000374732 LOC105371242A0A075B767 164 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 A0A1B0GVI7 797 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TMEM200CA6NKL6 621 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 NPIPA5E9PKD4 350 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 NPIPA3F8WFD2 350 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 YY2O15391 372 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ARSBP15848 533 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TBPP20226 339 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 DUSP1P28562 367 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 CNN1P51911 297 aaKnown RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 TMBIM6P55061 237 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ZNF155Q12901 538 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 LDLRAD2Q5SZI1 272 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ZNF770Q6IQ21 691 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 CMTM8Q8IZV2 173 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 B3GNT7Q8NFL0 401 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 OR2T11Q8NH01 316 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 HPSE2Q8WWQ2 592 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 FCRL5Q96RD9 977 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 ORAI3Q9BRQ5 295 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 HHATLQ9HCP6 504 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 TMEM181Q9P2C4 612 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 NPIPA1Q9UND3 350 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 PDE10AQ9Y233 779 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 YLPM1P49750 1951 aaKnown RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 LOC102723996A0A087X1L8 192 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 A0A0G2JLL6 359 aaPredicted RBP7.24□□□□□ -1.25
USP48-203ENST00000374732 A0A1B0GUS0 222 aa7.24□□□□□ -1.25
USP48-203ENST00000374732 HPP00738 406 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms