RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 ARIH2OSQ8N7S6 290 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 SLC38A4Q969I6 547 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 ADAD1Q96M93 576 aaKnown RBP12.38□□□□□ -0.43
UBXN11-207ENST00000374223 RHNO1Q9BSD3 238 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 PIF1Q9H611 641 aa12.38□□□□□ -0.43
UBXN11-207ENST00000374223 THUMPD1Q9NXG2 353 aaKnown RBP12.38□□□□□ -0.43
UBXN11-207ENST00000374223 CRNNQ9UBG3 495 aaPredicted RBP12.38□□□□□ -0.43
UBXN11-207ENST00000374223 A0A087WUJ7 227 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 A0A0B4J2E0 115 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 A0A1B0GX12 115 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TMEM129A0AVI4 362 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TMEM247A6NEH6 219 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 A8MV72 311 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 H7C417 338 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 M0R3G1 203 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 ZNF43P17038 809 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TGFBR3Q03167 851 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SQLEQ14534 574 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 NRF1Q16656 503 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TMEM249Q2WGJ8 235 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SOX7Q9BT81 388 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 RAD21L1Q9H4I0 556 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TMEM38AQ9H6F2 299 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 RPS6KB2Q9UBS0 482 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 GMEB1Q9Y692 573 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TRAV36DV7A0A075B6V5 113 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 ARPC4-TTLL3A0A0A6YYG9 625 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 FBP2O00757 339 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SERPINI2O75830 405 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SASH3O75995 380 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 VAMP5O95183 116 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 WNT11O96014 354 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TNFRSF1BP20333 461 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 CD247P20963 164 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 FUT4P22083 530 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 THBS4P35443 961 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 GZMMP51124 257 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 ATP4BP51164 291 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 IDH3GP51553 393 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 PCBP3P57721 371 aaKnown RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 RGS8P57771 180 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 IL1RL1Q01638 556 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 C6orf52Q5T4I8 152 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 FAM69AQ5T7M9 428 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 CLEC2AQ6UVW9 174 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 IL17RELQ6ZVW7 336 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 H1FNTQ75WM6 255 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SSX8Q7RTT4 187 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 DHDDSQ86SQ9 333 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 MDP1Q86V88 176 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 DEPDC4Q8N2C3 294 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 LRRC17Q8N6Y2 441 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 OR6T1Q8NGN1 323 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 SLC41A3Q96GZ6 507 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 TNFRSF13CQ96RJ3 184 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 ARHGDIGQ99819 225 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 FKRPQ9H9S5 495 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 CA10Q9NS85 328 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 INTS9Q9NV88 658 aaKnown RBP12.37□□□□□ -0.43
UBXN11-207ENST00000374223 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
UBXN11-207ENST00000374223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.36□□□□□ -0.432e-6■■■■□ 21.5
UBXN11-207ENST00000374223 SLC35F4A4IF30 521 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 CPSF4LA6NMK7 179 aaKnown RBP12.36□□□□□ -0.43
UBXN11-207ENST00000374223 VWC2LB2RUY7 222 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 RPL36A-HNRNPH2H7BZ11 118 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 M0QX08 132 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 AIM2O14862 343 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 SLC43A1O75387 559 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 F12P00748 615 aaPredicted RBP12.36□□□□□ -0.43
UBXN11-207ENST00000374223 HLA-HP01893 362 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 OR4A8P0C604 315 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 IGHV4-31P0DP07 118 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 ZNF16P17020 682 aaPredicted RBP12.36□□□□□ -0.43
UBXN11-207ENST00000374223 SLC6A2P23975 617 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 EFNA4P52798 201 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
UBXN11-207ENST00000374223 CAMK2DQ13557 499 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 C1DQ13901 141 aaKnown RBP12.36□□□□□ -0.43
UBXN11-207ENST00000374223 ZSWIM7Q19AV6 140 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 ULK3Q6PHR2 472 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 LINC00114Q6XXX2 140 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 ARMC8Q8IUR7 673 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 DYDC1Q8WWB3 177 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 FAM168AQ92567 244 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
UBXN11-207ENST00000374223 TAMM41Q96BW9 452 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms