RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 YAP1P46937 504 aaKnown RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 PPA1Q15181 289 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 TAB1Q15750 504 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 FXNQ16595 210 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 OR7E24Q6IFN5 339 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 HIST3H2AQ7L7L0 130 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 NKAIN4Q8IVV8 208 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 HIST1H2ACQ93077 130 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 ALKBH3Q96Q83 286 aaPredicted RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 GORASP2Q9H8Y8 452 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 MEPEQ9NQ76 525 aaPredicted RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 DCAF13Q9NV06 445 aaKnown RBP10.59□□□□□ -0.71
HDAC8-201ENST00000373554 MED31Q9Y3C7 131 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 SNX13Q9Y5W8 968 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 POLQO75417 2590 aa10.59□□□□□ -0.71
HDAC8-201ENST00000373554 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 FREM1Q5H8C1 2179 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 MS4A18H0YCH9 400 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PLPP3O14495 311 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 ARPC2O15144 300 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 SERPINI2O75830 405 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 HPRP00739 348 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 IGF2P01344 180 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 ASAH2BP0C7U1 165 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 UGT2B15P54855 530 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 TRAM2Q15035 370 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 MS4A18Q3C1V0 323 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 C9orf135Q5VTT2 229 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 KLHL24Q6TFL4 600 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PAMR1Q6UXH9 720 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 TRPM8Q7Z2W7 1104 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PXKQ7Z7A4 578 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 ARHGAP24Q8N264 748 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 GPR137CQ8N3F9 429 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 C17orf78Q8N4C9 275 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 RBM15BQ8NDT2 890 aaKnown RBP10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PIK3C3Q8NEB9 887 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PFN4Q8NHR9 129 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 NRGNQ92686 78 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 SGTBQ96EQ0 304 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 PLPPR2Q96GM1 343 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 NSMCE2Q96MF7 247 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 LINC00470Q9BZP3 86 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 ESRP2Q9H6T0 727 aaKnown RBP10.58□□□□□ -0.72
HDAC8-201ENST00000373554 RHCGQ9UBD6 479 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 CD300AQ9UGN4 299 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 FAM32AQ9Y421 112 aaKnown RBP10.58□□□□□ -0.72
HDAC8-201ENST00000373554 TACC2O95359 2948 aa10.58□□□□□ -0.72
HDAC8-201ENST00000373554 HTR3EA5X5Y0 456 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ZNF726A6NNF4 738 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 C11orf98E9PRG8 122 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 J3KTA2 159 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 KLF4O43474 513 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 RNF13O43567 381 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 UPK3AO75631 287 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 OR7A10O76100 309 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ZNF432O94892 652 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 HLA-DOBP13765 273 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 CDH2P19022 906 aaPredicted RBP10.57□□□□□ -0.72
HDAC8-201ENST00000373554 FOXG1P55316 489 aaPredicted RBP10.57□□□□□ -0.72
HDAC8-201ENST00000373554 LGALS3BPQ08380 585 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 GABRA6Q16445 453 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 HMBOX1Q6NT76 420 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 SLC46A3Q7Z3Q1 461 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 LRRC17Q8N6Y2 441 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ANKK1Q8NFD2 765 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 OR52N5Q8NH56 324 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 NINJ1Q92982 152 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 MUS81Q96NY9 551 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 OR2M2Q96R28 347 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ANKRD19PQ9H560 264 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 PLEKHF2Q9H8W4 249 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 C20orf141Q9NUB4 165 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 MED29Q9NX70 200 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ST6GALNAC2Q9UJ37 374 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 AMDHD2Q9Y303 409 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 ENPP4Q9Y6X5 453 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 V9GYQ6 96 aa10.57□□□□□ -0.72
HDAC8-201ENST00000373554 A0A1W2PPR1 153 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 BLOC1S5-TXNDC5H3BN57 136 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 hCG_2039718K7EN88 272 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 FFAR1O14842 300 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 RAF1P04049 648 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 CD3EP07766 207 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 IFI30P13284 250 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 IFNGR1P15260 489 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 ITGA2P17301 1181 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 FUT1P19526 365 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 DNASE1P24855 282 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 MSX2P35548 267 aaPredicted RBP10.56□□□□□ -0.72
HDAC8-201ENST00000373554 SH3BGRP55822 239 aaPredicted RBP10.56□□□□□ -0.72
HDAC8-201ENST00000373554 ROR2Q01974 943 aaKnown RBP10.56□□□□□ -0.72
HDAC8-201ENST00000373554 ZP4Q12836 540 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 KEAP1Q14145 624 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 C1QTNF12Q5T7M4 302 aa10.56□□□□□ -0.72
HDAC8-201ENST00000373554 CARD17Q5XLA6 110 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms