RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 H7C1C5 153 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 DCTN6O00399 190 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 UMODP07911 640 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 ZNF883P0CG24 379 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 HTR3AP46098 478 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 LCN6P62502 163 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 STK35Q8TDR2 534 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 ST8SIA1Q92185 356 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 KCNN2Q9H2S1 579 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 MED11Q9P086 117 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 NCDNQ9UBB6 729 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 DMDP11532 3685 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 ALPK2Q86TB3 2170 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 C11orf98E9PRG8 122 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 NCR1O76036 304 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 ACVR1BP36896 505 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 SUMO3P55854 103 aaPredicted RBP17.72■□□□□ 0.43
HDAC1-201ENST00000373548 SLC22A16Q86VW1 577 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 ZNF511Q8NB15 262 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 RELTQ969Z4 430 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 MOKQ9UQ07 419 aa17.72■□□□□ 0.43
HDAC1-201ENST00000373548 KLF7O75840 302 aaPredicted RBP17.71■□□□□ 0.43
HDAC1-201ENST00000373548 SNX4O95219 450 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 F8A1P23610 371 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 GRPRP30550 384 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 TMED10P49755 219 aaKnown RBP17.71■□□□□ 0.43
HDAC1-201ENST00000373548 TRAM1Q15629 374 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 OR10G3Q8NGC4 313 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 ELP5Q8TE02 316 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 RHBDD1Q8TEB9 315 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 SNX33Q8WV41 574 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 AP3S1Q92572 193 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 DEFB126Q9BYW3 111 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 RNF32Q9H0A6 362 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 PPIL3Q9H2H8 161 aaKnown RBP17.71■□□□□ 0.43
HDAC1-201ENST00000373548 MARCH7Q9H992 704 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
HDAC1-201ENST00000373548 SLC39A1Q9NY26 324 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 KLRF1Q9NZS2 232 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 PTRH2Q9Y3E5 179 aaKnown RBP17.71■□□□□ 0.43
HDAC1-201ENST00000373548 RALGAPA1Q6GYQ0 2036 aa17.71■□□□□ 0.43
HDAC1-201ENST00000373548 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 OGG1O15527 345 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 AHSA1O95433 338 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 FBXO45P0C2W1 286 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 PTGDSP41222 190 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 BTBD16Q32M84 506 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 ARSKQ6UWY0 536 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF517Q6ZMY9 492 aaPredicted RBP17.71■□□□□ 0.42
HDAC1-201ENST00000373548 ABHD4Q8TB40 342 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 SLC22A8Q8TCC7 542 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 INIPQ9NRY2 104 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 TRAPPC4Q9Y296 219 aa17.71■□□□□ 0.42
HDAC1-201ENST00000373548 C9J4A7 227 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 SC5DO75845 299 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 DXOO77932 396 aaKnown RBP17.7■□□□□ 0.42
HDAC1-201ENST00000373548 DKK1O94907 266 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 GBX2P52951 348 aaPredicted RBP17.7■□□□□ 0.42
HDAC1-201ENST00000373548 HSF2Q03933 536 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 C5orf46Q6UWT4 87 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 OR6V1Q8N148 313 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 GHSRQ92847 366 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 RASL10BQ96S79 203 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 CCDC32Q9BV29 185 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 RHBDL2Q9NX52 303 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 GNG8Q9UK08 70 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 PCDHGB2Q9Y5G2 931 aa17.7■□□□□ 0.42
HDAC1-201ENST00000373548 IGHV1-45A0A0A0MS14 117 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 FUOMA2VDF0 154 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 FTCDNL1E5RQL4 147 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 RENP00797 406 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 CELA2AP08217 269 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 MTNR1BP49286 362 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 DLX5P56178 289 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 CDK5R1Q15078 307 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ANGPT1Q15389 498 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ZNF79Q15937 498 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 FAM27D1Q5T7N8 215 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 DDI2Q5TDH0 399 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SLC16A9Q7RTY1 509 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 GALNT6Q8NCL4 622 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 OR2T4Q8NH00 348 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 THAP4Q8WY91 577 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ATF6BQ99941 703 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SYT4Q9H2B2 425 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ACOXLQ9NUZ1 547 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ETAA1Q9NY74 926 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 PPP4R1LQ9P1A2 415 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 VDAC3Q9Y277 283 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 PRR32B1ATL7 298 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ARHGEF9O43307 516 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 PLGP00747 810 aaPredicted RBP17.69■□□□□ 0.42
HDAC1-201ENST00000373548 AHCYP23526 432 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 CCKBRP32239 447 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SIRPAP78324 504 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 NTRK2Q16620 822 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 ZMAT1Q5H9K5 638 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 SLC6A19Q695T7 634 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 NR2C2APQ86WQ0 139 aa17.69■□□□□ 0.42
HDAC1-201ENST00000373548 TIGD4Q8IY51 512 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms