RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ZNF74Q16587 644 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 PODNL1Q6PEZ8 512 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 XKRXQ6PP77 449 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 FAM214BQ7L5A3 538 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 SLC46A3Q7Z3Q1 461 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 BTLAQ7Z6A9 289 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 LRRC17Q8N6Y2 441 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 PIGXQ8TBF5 258 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 CYGBQ8WWM9 190 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 TFAP2CQ92754 450 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 STARD4Q96DR4 205 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 SFXN3Q9BWM7 321 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 C12orf49Q9H741 205 aa16.48■□□□□ 0.23
CDX4-201ENST00000373514 SH3PXD2BA1X283 911 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 ARRDC5A6NEK1 342 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 EEF1E1-BLOC1S5C9J1V9 151 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 EEF1E1O43324 174 aaKnown RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 DENRO43583 198 aaKnown RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 OR2T1O43869 369 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 EIF1BO60739 113 aaKnown RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 ANXA8P13928 327 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 AGAP20933 346 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 EDNRAP25101 427 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 RAD23AP54725 363 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 IL1RL1Q01638 556 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 RFX4Q33E94 735 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 ZNF770Q6IQ21 691 aaPredicted RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 NUFIP2Q7Z417 695 aaKnown RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 GALNT5Q7Z7M9 940 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 GPAT4Q86UL3 456 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 NRMQ8IXM6 262 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 SLC43A2Q8N370 569 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 KDM8Q8N371 416 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 DHRSXQ8N5I4 330 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 NAA11Q9BSU3 229 aaPredicted RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 SLC19A3Q9BZV2 496 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 OPN3Q9H1Y3 402 aaPredicted RBP16.47■□□□□ 0.23
CDX4-201ENST00000373514 TOR3AQ9H497 397 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 ANKRD19PQ9H560 264 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 KRT84Q9NSB2 600 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 KLHL9Q9P2J3 617 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 ICE1Q9Y2F5 2266 aa16.47■□□□□ 0.23
CDX4-201ENST00000373514 A0A087WUU8 490 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
CDX4-201ENST00000373514 OPRM1P35372 400 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 CTBP2P56545 445 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 MED21Q13503 144 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 LUZP2Q86TE4 346 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 AQP11Q8NBQ7 271 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 LILRB4Q8NHJ6 448 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 MBOAT4Q96T53 435 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 BCO1Q9HAY6 547 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 CHST11Q9NPF2 352 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 ZNF629Q9UEG4 869 aaPredicted RBP16.46■□□□□ 0.23
CDX4-201ENST00000373514 EMC9Q9Y3B6 208 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 MED31Q9Y3C7 131 aa16.46■□□□□ 0.23
CDX4-201ENST00000373514 C19orf84I3L1E1 186 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 OR10H3O60404 316 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 IL18BPO95998 194 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 GASTP01350 101 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 CRHP06850 196 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 IFI30P13284 250 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 GRNP28799 593 aaKnown RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 CAPGP40121 348 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 SLC36A3Q495N2 470 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 LINC00471Q8N535 108 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 OR6S1Q8NH40 331 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 ACOT11Q8WXI4 607 aaPredicted RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 HS6ST2Q96MM7 605 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 NIPSNAP1Q9BPW8 284 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 GLRX2Q9NS18 164 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 B3GAT1Q9P2W7 334 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 FLVCR1Q9Y5Y0 555 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 COL12A1Q99715 3063 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 IGKV3D-15A0A087WSY6 115 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 CGAP01215 116 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 YES1P07947 543 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 CDH2P19022 906 aaPredicted RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 MAKP20794 623 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 NTF4P34130 210 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 SLC16A1P53985 500 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 ADARB1P78563 741 aaKnown RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 TFF3Q07654 80 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 SLC17A1Q14916 467 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 SLC25A35Q3KQZ1 300 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 TMEM201Q5SNT2 666 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 GTF2IRD2BQ6EKJ0 949 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 PGBD2Q6P3X8 592 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 ZNF730Q6ZMV8 503 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 MAMDC2Q7Z304 686 aaPredicted RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 GTF2IRD2Q86UP8 949 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 OR4K5Q8NGD3 323 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 OR9K2Q8NGE7 335 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 OR6K3Q8NGY3 331 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 GTPBP3Q969Y2 492 aaKnown RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 SGTBQ96EQ0 304 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 CNBD2Q96M20 576 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 ZNF385AQ96PM9 386 aaKnown RBP16.45■□□□□ 0.22
CDX4-201ENST00000373514 ASPNQ9BXN1 380 aa16.45■□□□□ 0.22
CDX4-201ENST00000373514 RIBC2Q9H4K1 309 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms