RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 MED11Q9P086 117 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TRBV23OR9-2A0A075B6M9 112 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 EDDM13A0A1B0GTR0 161 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 A0A1B0GWA3 101 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 UBE2QL1A1L167 161 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 AGR2O95994 175 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 MAS1P04201 325 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 GABRA3P34903 492 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 HAAOP46952 286 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 ART1P52961 327 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 DLX5P56178 289 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 SORDQ00796 357 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 RBMS2Q15434 407 aaKnown RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 SYS1Q8N2H4 156 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 MUC20Q8N307 709 aaPredicted RBP12.55□□□□□ -0.4
USP49-201ENST00000373006 STK35Q8TDR2 534 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 FBXO17Q96EF6 278 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 EVA1AQ9H8M9 152 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 TRPV4Q9HBA0 871 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 INSL6Q9Y581 213 aa12.55□□□□□ -0.4
USP49-201ENST00000373006 COL4A6Q14031 1691 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 A0A1B0GTH9 108 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 D6RAR5 112 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 F8W036 122 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 NDUFA2O43678 99 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ITGA10O75578 1167 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ARHGAP11AQ6P4F7 1023 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 UNQ9370/PRO34162Q6UXP9 181 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 VN1R4Q7Z5H5 301 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 OR8S1Q8NH09 359 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 TNFAIP8L1Q8WVP5 186 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 MRPS24Q96EL2 167 aaKnown RBP12.54□□□□□ -0.4
USP49-201ENST00000373006 NKX3-1Q99801 234 aaPredicted RBP12.54□□□□□ -0.4
USP49-201ENST00000373006 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
USP49-201ENST00000373006 CRB3Q9BUF7 120 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 CHST6Q9GZX3 395 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 FBXL3Q9UKT7 428 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ABHD14A-ACY1A0A1B0GW23 586 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 SNRPGP15A8MWD9 76 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ACOT7O00154 380 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ZNF749O43361 778 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 EPCAMP16422 314 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 KCNJ3P48549 501 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 MAT1AQ00266 395 aaKnown RBP12.54□□□□□ -0.4
USP49-201ENST00000373006 RUNX2Q13950 521 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 NDUFAF6Q330K2 333 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ZNF600Q6ZNG1 722 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 RELTQ969Z4 430 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 SLC38A3Q99624 504 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 MFFQ9GZY8 342 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 TCF7L1Q9HCS4 588 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 ZNF281Q9Y2X9 895 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
USP49-201ENST00000373006 OR5K4A6NMS3 321 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 F5H5P2 479 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 ADRA2CP18825 462 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 ACHEP22303 614 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 GUCA2AQ02747 115 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 B3GNTL1Q67FW5 361 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 TMPRSS12Q86WS5 348 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 OR4C16Q8NGL9 310 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 DVL3Q92997 716 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 HAVCR1Q96D42 359 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 TSSK2Q96PF2 358 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 TAS2R3Q9NYW6 316 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 GLS2Q9UI32 602 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 PRICKLE3O43900 615 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 SSX5O60225 188 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 IL5P05113 134 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 MC2RQ01718 297 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 TNFRSF17Q02223 184 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 BEX5Q5H9J7 111 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 CDH26Q8IXH8 852 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 ZNF511Q8NB15 262 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 OR5M9Q8NGP3 310 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 RASD2Q96D21 266 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 Q96M85 177 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 GAS2L1Q99501 681 aaPredicted RBP12.53□□□□□ -0.4
USP49-201ENST00000373006 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 RBBP9O75884 186 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 OR8G3PP0DMU2 310 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 CPMP14384 443 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 CEBPBP17676 345 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 PPM1AP35813 382 aa12.53□□□□□ -0.4
USP49-201ENST00000373006 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms