RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 OR7E24Q6IFN5 339 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 FIGLAQ6QHK4 219 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 HIST3H2AQ7L7L0 130 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 OVCH2Q7RTZ1 564 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 IQCF2Q8IXL9 164 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 ZDHHC1Q8WTX9 485 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 HIST1H2ACQ93077 130 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 LRFN5Q96NI6 719 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 XIRP2A4UGR9 3374 aa14.97□□□□□ -0.01
SDC4-201ENST00000372733 RLN1P04808 185 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 CALCBP10092 127 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 C5AR1P21730 350 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 GJA4P35212 333 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 MRPS10P82664 201 aaKnown RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 SRSF5Q13243 272 aaKnown RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 IL10RAQ13651 578 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 NNATQ16517 81 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 PCGF3Q3KNV8 242 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 LINC01590Q5TEZ4 76 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 DCAF12L2Q5VW00 463 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ZCCHC12Q6PEW1 402 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 LINC00114Q6XXX2 140 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 CFAP77Q6ZQR2 320 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 DND1Q8IYX4 353 aaKnown RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 SLC43A2Q8N370 569 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 OR4D10Q8NGI6 311 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 OR4C16Q8NGL9 310 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 OR1E3Q8WZA6 343 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 MRPL48Q96GC5 212 aaKnown RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 NMNAT2Q9BZQ4 307 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 SHARPINQ9H0F6 387 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 TTYH1Q9H313 450 aaPredicted RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 LYRM4Q9HD34 91 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 TMEM72A0PK05 275 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 URADA6NGE7 173 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ANXA2P2A6NMY6 339 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 H0YGG7 62 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ZNF10P21506 573 aaPredicted RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 DLX5P56178 289 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ARF3P61204 181 aaPredicted RBP14.96□□□□□ -0.01
SDC4-201ENST00000372733 PSG6Q00889 435 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ZNF684Q5T5D7 378 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 LEG1Q6P5S2 330 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ULK3Q6PHR2 472 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 DPY19L2P2Q6ZN68 376 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 CAMKVQ8NCB2 501 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 OR8K3Q8NH51 312 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 SCARB1Q8WTV0 552 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 PMEPA1Q969W9 287 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 ALG12Q9BV10 488 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 LMAN2LQ9H0V9 348 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 PFDN2Q9UHV9 154 aa14.96□□□□□ -0.01
SDC4-201ENST00000372733 TRAV8-7A0A075B6U6 113 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 CHURC1-FNTBB4DL54 471 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 H0YC42 278 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 GOSR2O14653 212 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 KCNJ13O60928 360 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 CTNSO60931 367 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 GLSO94925 669 aaPredicted RBP14.96□□□□□ -0.02
SDC4-201ENST00000372733 ADH1BP00325 375 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 GABRA1P14867 456 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 MECP2P51608 486 aaKnown RBP14.96□□□□□ -0.02
SDC4-201ENST00000372733 MAZP56270 477 aaKnown RBP14.96□□□□□ -0.02
SDC4-201ENST00000372733 YOD1Q5VVQ6 348 aaPredicted RBP14.96□□□□□ -0.02
SDC4-201ENST00000372733 FAM122CQ6P4D5 195 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 MAMSTRQ6ZN01 415 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 STPG2Q8N412 459 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 PNPLA2Q96AD5 504 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 POLE3Q9NRF9 147 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 RXFP3Q9NSD7 469 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 STARD5Q9NSY2 213 aa14.96□□□□□ -0.02
SDC4-201ENST00000372733 EML5Q05BV3 1969 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 UBE2QL1A1L167 161 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 POM121BA6NF01 834 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 A8MXK9 166 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 MAS1P04201 325 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 LTBQ06643 244 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 Q499Y3 187 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 SLC35D3Q5M8T2 416 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 SLC36A1Q7Z2H8 476 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 LRRTM1Q86UE6 522 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 GLB1L2Q8IW92 636 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 FAM3CQ92520 227 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 FGF13Q92913 245 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 CTHRC1Q96CG8 243 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 ZNF578Q96N58 590 aaPredicted RBP14.95□□□□□ -0.02
SDC4-201ENST00000372733 SLITRK2Q9H156 845 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 MED9Q9NWA0 146 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 DTX4Q9Y2E6 619 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 SPACA6W5XKT8 324 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 A0A1B0GTQ1 180 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 MEIS3P1A6NDR6 274 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 GLCEO94923 617 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 PPP3CBP16298 524 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 GUCA2AQ02747 115 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 DEFB115Q30KQ5 88 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 LIPNQ5VXI9 398 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 OR10AC1Q8NH08 325 aa14.95□□□□□ -0.02
SDC4-201ENST00000372733 SLC22A18Q96BI1 424 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms