RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 CELA2BP08218 269 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 OR56A5P0C7T3 313 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 GGT1P19440 569 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 EEF1B2P24534 225 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 PSPHP78330 225 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CNTN1Q12860 1018 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NFATC4Q14934 902 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ATP6AP1Q15904 470 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ZNF385BQ569K4 471 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ANKS6Q68DC2 871 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CAPN13Q6MZZ7 669 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 SIGLEC15Q6ZMC9 328 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 HORMAD1Q86X24 394 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SLC22A18ASQ8N1D0 253 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 LINC01555Q8NAE3 123 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 M1APQ8TC57 530 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SFXN5Q8TD22 340 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FKBP10Q96AY3 582 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 RNF170Q96K19 258 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TEX37Q96LM6 180 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 COPS8Q99627 209 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SEC22CQ9BRL7 303 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ST6GALNAC5Q9BVH7 336 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 DDA1Q9BW61 102 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NPLQ9BXD5 320 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 TMEM231Q9H6L2 316 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 DCLRE1BQ9H816 532 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FZD3Q9NPG1 666 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 BATF3Q9NR55 127 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 THSD1Q9NS62 852 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 EXD2Q9NVH0 621 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SMPD4Q9NXE4 827 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PEMTQ9UBM1 199 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 URGCP-MRPS24S4R325 110 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NCKAP5O14513 1909 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SCN2AQ99250 2005 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 METTL21EPA6NDL7 271 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TMEM202A6NGA9 273 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 LILRA5A6NI73 299 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SMLR1H3BR10 107 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SMIM24O75264 130 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SERPINI2O75830 405 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ERCC1P07992 297 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 TACSTD2P09758 323 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SPP1P10451 314 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 GABRG2P18507 467 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CD72P21854 359 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 UGT1A1P22309 533 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 LAP3P28838 519 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PRDX3P30048 256 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 ASCL1P50553 236 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 BCAP31P51572 246 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CTSCP53634 463 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MRPS11P82912 194 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 IRF4Q15306 451 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TBR1Q16650 682 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 HP1BP3Q5SSJ5 553 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 SPOUT1Q5T280 376 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 KHDRBS2Q5VWX1 349 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 SAXO2Q658L1 398 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PGAP1Q75T13 922 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ARPINQ7Z6K5 226 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TMPRSS12Q86WS5 348 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CARM1Q86X55 608 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PLCZ1Q86YW0 608 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SLC30A8Q8IWU4 369 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 OR4F6Q8NGB9 312 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 OR6Q1Q8NGQ2 317 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ST8SIA2Q92186 375 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 TM9SF4Q92544 642 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 SNAPC3Q92966 411 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PPP3R2Q96LZ3 170 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ZNF681Q96N22 645 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PITX2Q99697 317 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 DOK1Q99704 481 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 APOL2Q9BQE5 337 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MS4A8Q9BY19 250 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 CIPCQ9C0C6 399 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 KAT8Q9H7Z6 458 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 A4GALTQ9NPC4 353 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NDRG2Q9UN36 371 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 POMPQ9Y244 141 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 EFCAB7A8K855 629 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 K7ESM1 405 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NME4O00746 187 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 STX7O15400 261 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 PIAS1O75925 651 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 LYPD3O95274 346 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ZNF682O95780 498 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 FADS2O95864 444 aaKnown RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 EGFP01133 1207 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 HPXP02790 462 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PRF1P14222 555 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 NKX2-5P52952 324 aaPredicted RBP3.51□□□□□ -1.85
MCF2-203ENST00000370576 PLP1P60201 277 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 MED21Q13503 144 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ABRAXAS2Q15018 415 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 PON3Q15166 354 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 RBBP7Q16576 425 aa3.51□□□□□ -1.85
MCF2-203ENST00000370576 ISXQ2M1V0 245 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms