RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 A0A087WUU8 490 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 TRBV4-1A0A0J9YWV2 114 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 DHRS12A0PJE2 317 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 HTR3EA5X5Y0 456 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 AQP12BA6NM10 295 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 BLOC1S5-TXNDC5H3BN57 136 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 TRAF3IP2O43734 574 aaPredicted RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 KRT33AO76009 404 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 CNOT4O95628 575 aaKnown RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 ADAP00813 363 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 FUT1P19526 365 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 GPR4P46093 362 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 PCYT1AP49585 367 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 FBXW9Q5XUX1 488 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 PODNL1Q6PEZ8 512 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 STAC2Q6ZMT1 411 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 AQP12AQ8IXF9 295 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 RNF113BQ8IZP6 322 aaKnown RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 GABRG1Q8N1C3 465 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 ANKK1Q8NFD2 765 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 KISS1RQ969F8 398 aaPredicted RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 RSRC1Q96IZ7 334 aaKnown RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 DHRS1Q96LJ7 313 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 MED18Q9BUE0 208 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 SLCO5A1Q9H2Y9 848 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 MMADHCQ9H3L0 296 aaPredicted RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 ASB6Q9NWX5 421 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 CRIM1Q9NZV1 1036 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 MALT1Q9UDY8 824 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 KCNN3Q9UGI6 736 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 NDRG3Q9UGV2 375 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 POMPQ9Y244 141 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 TMEM5Q9Y2B1 443 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
COL9A1-204ENST00000370496 FREM1Q5H8C1 2179 aa13.12□□□□□ -0.31
COL9A1-204ENST00000370496 LOC102725191A0A1B0GVB3 256 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 SH3D21A4FU49 640 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 EFCAB9A8MZ26 197 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 MS4A18H0YCH9 400 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 SLC43A1O75387 559 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 LYZL6O75951 148 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 RAP2AP10114 183 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 HLA-DOBP13765 273 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 NTF4P34130 210 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 MAGEA2P43356 314 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 SELENOPP49908 381 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 PRKCDQ05655 676 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 RPL18Q07020 188 aaKnown RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 FAPQ12884 760 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 P2RY6Q15077 328 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 MS4A18Q3C1V0 323 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 TBPL2Q6SJ96 375 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 PIWIL3Q7Z3Z3 882 aaKnown RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 ABHD12BQ7Z5M8 362 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 PXKQ7Z7A4 578 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 MEX3DQ86XN8 651 aaKnown RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 OR4K5Q8NGD3 323 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 LINC01560Q8TB33 94 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 FAM46AQ96IP4 442 aaKnown RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
COL9A1-204ENST00000370496 ACTR6Q9GZN1 396 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 MCCC2Q9HCC0 563 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 TMCC3Q9ULS5 477 aa13.11□□□□□ -0.31
COL9A1-204ENST00000370496 OR6C65A6NJZ3 312 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 MCIDASD6RGH6 385 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ZNF587BE7ETH6 402 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 CIB2O75838 187 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 PSMB1P20618 241 aaKnown RBP13.1□□□□□ -0.31
COL9A1-204ENST00000370496 COX5AP20674 150 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 MAKP20794 623 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ERFP50548 548 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ITGADQ13349 1161 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 TSC22D1Q15714 1073 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 IQCCQ4KMZ1 466 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 TSPO2Q5TGU0 170 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 C1orf146Q5VVC0 180 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 CARD17Q5XLA6 110 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ANKRD34AQ69YU3 496 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ADGRG5Q8IZF4 528 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 STEAP2Q8NFT2 490 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 FAM222BQ8WU58 562 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 LIPHQ8WWY8 451 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ZC3HAV1LQ96H79 300 aaKnown RBP13.1□□□□□ -0.31
COL9A1-204ENST00000370496 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 MED29Q9NX70 200 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 TAS2R16Q9NYV7 291 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 PKDREJQ9NTG1 2253 aa13.1□□□□□ -0.31
COL9A1-204ENST00000370496 TRAV27A0A087WT01 109 aa13.09□□□□□ -0.31
COL9A1-204ENST00000370496 A0A1W2PRG6 482 aa13.09□□□□□ -0.31
COL9A1-204ENST00000370496 SH3PXD2BA1X283 911 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms