RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 SURF4O15260 269 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 RRP8O43159 456 aaKnown RBP9.68□□□□□ -0.86
PRDM1-201ENST00000369089 JTBO76095 146 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 PSMB6P28072 239 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 CDKN2DP55273 166 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 ACTR1AP61163 376 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 CBFBQ13951 182 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 TAZQ16635 292 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 PYCR3Q53H96 274 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 PRAMEF20Q5VT98 475 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 NOXRED1Q6NXP6 359 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 ABHD12BQ7Z5M8 362 aaPredicted RBP9.68□□□□□ -0.86
PRDM1-201ENST00000369089 NUBPLQ8TB37 319 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 MAL2Q969L2 176 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 UBXN10Q96LJ8 280 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 PCBD2Q9H0N5 130 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 DOK5Q9P104 306 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 AUP1Q9Y679 476 aa9.68□□□□□ -0.86
PRDM1-201ENST00000369089 GOLGA4Q13439 2230 aaKnown RBP9.68□□□□□ -0.86
PRDM1-201ENST00000369089 PIRO00625 290 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 NME2P1O60361 137 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 BPIP17213 487 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CTHP32929 405 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CD68P34810 354 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ACTR1BP42025 376 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF140P52738 457 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ERVPABLB-1P60509 514 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF528Q3MIS6 628 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 EXOSC6Q5RKV6 272 aaKnown RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF626Q68DY1 528 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 GRINAQ7Z429 371 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 THAP4Q8WY91 577 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 MRGPRX4Q96LA9 322 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 TTTY10Q9BZA0 68 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 TMEM88BA6NKF7 163 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SERPINA2P20848 420 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 LMO2P25791 158 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ELFN2Q5R3F8 820 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 NHLRC1Q6VVB1 395 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF467Q7Z7K2 595 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 GALNT16Q8N428 558 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF709Q8N972 641 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SLC35G5Q96KT7 338 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF558Q96NG5 402 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ELL3Q9HB65 397 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 RXFP3Q9NSD7 469 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 FBXO10Q9UK96 956 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 MEIS3P1A6NDR6 274 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SMPD2O60906 423 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF623O75123 536 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 AIFM1O95831 613 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SOD1P00441 154 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 OR4Q2P0C623 313 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 FGF9P31371 208 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 MAPK8P45983 427 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ARHGAP19Q14CB8 494 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 TARBP2Q15633 366 aaKnown RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CCL14Q16627 93 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 OPN5Q6U736 354 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 OR52B4Q8NGK2 314 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF75AQ96N20 296 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SDHCQ99643 169 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 POFUT1Q9H488 388 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 A0A0B4J293 547 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CDHR4A6H8M9 788 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 UPK1AO00322 258 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CSTAP01040 98 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 GASTP01350 101 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 HPXP02790 462 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 C8GP07360 202 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ELFN1P0C7U0 828 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 F3P13726 295 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 S1PR1P21453 382 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 FDXRP22570 491 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 GALNSP34059 522 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ERVFRD-1P60508 538 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ACOT6Q3I5F7 207 aaPredicted RBP9.67□□□□□ -0.86
PRDM1-201ENST00000369089 STEAP1BQ6NZ63 245 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 ZNF66Q6ZN08 573 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 Q6ZTK2 550 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 OR13C5Q8NGS8 318 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 PPP1R1CQ8WVI7 109 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CRYGNQ8WXF5 182 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SNX22Q96L94 193 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 SRMSQ9H3Y6 488 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 CSNK1G1Q9HCP0 422 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 OPN4Q9UHM6 478 aa9.67□□□□□ -0.86
PRDM1-201ENST00000369089 MYBPHLA2RUH7 354 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 A6NIZ1 184 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 OR6C76A6NM76 312 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 EPHX1P07099 455 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 TPPP2P59282 170 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 RAP1BP61224 184 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 LCN6P62502 163 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 GBX1Q14549 363 aa9.66□□□□□ -0.86
PRDM1-201ENST00000369089 RGNQ15493 299 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms